| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1279 |
|---|
| Symbol | |
|---|
| ID | 7089842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1510636 |
|---|
| End bp | 1511937 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643460184 |
|---|
| Product | DEAD/DEAH box helicase domain protein |
|---|
| Protein accession | YP_002357211 |
|---|
| Protein GI | 217972460 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0871578 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGATTTG AATCTTTTAG TTTTTCCCCC GAGATTTTGC GCGCTATCTC AGATTGCGGT
TATCAACAAA TGACGCCTAT TCAGCAGCAA GCGATACCTG CTATCCGCCG CGGCCAAGAT
GTCTTAGCCA GTGCCCAAAC CGGTACGGGT AAAACCGCCG CTTTCGCGCT GCCGATCCTG
CAAAAGATGG TTGAAAATCC AAGCGAAACG TTAAAGTCGA ATGCCCGCGT ATTAATTCTT
ACGCCGACCC GTGAGCTTGC GGCTCAAGTC GCTGACAACG TTACGGCTTA CTGCAAGTAC
TTAAACTTCA GCGTGTTAAC CATTTATGGT GGCGTAAAGA TAGAAACACA AGCGCAAAAG
CTGAAACGCG GCGCCGATGT GATTGTTGCC ACCCCAGGTC GCTTACTTGA GCACCTTACC
GCCTGTAACT TAAGCCTGTC GAACGTCGAC TTTTTAGTCC TAGACGAAGC CGATCGTATG
TTGGATATGG GCTTTAGCGC CGATATCCAA AAGATCCTTC AAGCGGTAAA TAAGAAACGT
CAAAACCTAT TGTTCTCAGC CACTTTCTCA AGTGCGGTGA AAAAACTCGC CAACGATATG
ATGGTTAAAC CGCAAGTGAT CAGCGTTGAT AAGCAAAACA CTACAGCCGA CACCGTCAGC
CAAGTGGTTT ATCCGGTTGA ACAACGCCGT AAACGTGAAC TGCTGTCAGA GCTAATCGGC
AAAAAAAACT GGCAACAGGT ATTGGTATTT ACCGCGACCC GTGATGCCGC CGATACACTC
GTCAAAGAAT TGAATTTAGA TGGGATCCCA TCAGAAGTGG TCCACGGTGA TAAAGGCCAA
GGCAGTCGTC GCCGCGCCCT ACGTGAGTTT GTTGCAGGTG ATGTACGCGT ACTGGTTGCC
ACCGAAGTCG CCGCCCGTGG TCTGGATATC CCAAGCCTTG AATACGTAGT TAACTATGAC
TTACCTTTCC TCGCCGAAGA CTATGTCCAC CGTATCGGTC GTACAGGCCG TGCGGGTAAA
ACTGGCGTAG CCATTTCTTT CGTGAGCCGC GAAGAAGAAC GTACCTTAGC CGATATCGAA
AAACTGATCG GTCAACAAAT TCGCCGCGTC ACTGTGCCAG GTTATGAAGT AGGCAGCCGC
GAATTGCTGT TAAAGCAATT GCAAACCCGC CGTAGCTTTG CCAAGAAGCA ACAAAGAACC
GACAATGTCG GCGCTCAAGT TACTGCTGAG AAAAACATGC AAGGCCGCCG CGTAAAAATG
AAGGTGGGTC AAGCGCCTAG CAAAGCGAAA AAGCTTAAGT AA
|
|---|
| Protein sequence | MRFESFSFSP EILRAISDCG YQQMTPIQQQ AIPAIRRGQD VLASAQTGTG KTAAFALPIL
QKMVENPSET LKSNARVLIL TPTRELAAQV ADNVTAYCKY LNFSVLTIYG GVKIETQAQK
LKRGADVIVA TPGRLLEHLT ACNLSLSNVD FLVLDEADRM LDMGFSADIQ KILQAVNKKR
QNLLFSATFS SAVKKLANDM MVKPQVISVD KQNTTADTVS QVVYPVEQRR KRELLSELIG
KKNWQQVLVF TATRDAADTL VKELNLDGIP SEVVHGDKGQ GSRRRALREF VAGDVRVLVA
TEVAARGLDI PSLEYVVNYD LPFLAEDYVH RIGRTGRAGK TGVAISFVSR EEERTLADIE
KLIGQQIRRV TVPGYEVGSR ELLLKQLQTR RSFAKKQQRT DNVGAQVTAE KNMQGRRVKM
KVGQAPSKAK KLK
|
|---|
| |