Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1278 |
Symbol | |
ID | 7089841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1509093 |
End bp | 1510493 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643460183 |
Product | amino acid permease-associated region |
Protein accession | YP_002357210 |
Protein GI | 217972459 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | [TIGR00905] transporter, basic amino acid/polyamine antiporter (APA) family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0546125 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGAGA ACAGGATAGG TCTCTGGTCA CTCACAGCCC TAGTGTTCAG CTCTATGGTA GGTGCGGGGA TTTTTAGCCT GCCGCAAAAC ATGGCCGAAG TGGCGGGTGT TCGAGCAGTG CTGATTGGCT GGGGGATCAC AGGTGTGGGC ATCTTGGCAT TGGCTGCGAG TTTCCTCTAT CTGTCGCGCT TGAAGCCTGA GCTTGATGGC GGCATTTATA CCTACGCGAG AGCCGGTTTT GGTGAGCTGG TGGGCTTTTT TTCTGCTTGG GGCTACTGGC TTTGCGCCAC CATAGGCGTG GTGGGATATT TAGTGATTGC GTTTGCCGCC CTTGGCAGCT TTGTCGATAC GCCGCAGCAA GTTTGGTTTG GCGAGGGCAA TACGCTGGCC GCTTTTATCG GTGAGTCGTG CATTTTGTGG GCGGTGCATT GGTTGGTCTC CCGCGGCGTA CAGCAGGCCG CCATGTTCAA TCTGGTGGCG ACATTAGCCA AAAGTTTGCC GTTATTGCTG TTTGTACTGT TTGCCTGCTA TTACTTTGAC CCTGTGACTT TTGCTCAGGA CCAAGCGGCC AGCACTTTAG CTGTGCCAGT GTCGGAGCAA GTGCGTAACA CTATGTTGAT CACGCTTTGG GTGTTTACCG GTATCGAAGG TGCGGCTGTG TTATCGGCGC GTGCTAAAAA TAAGCGGGAT GTGGGCACGG CGACTGTCCT TGGCGTCGTG CTGGCGCTAC TACTTTATGT GCTTATCTCT GTGTTAGCGC TGGGAATTTT AGCTCGTCCT GAACTTGCAG CGCTGCCTAA TCCCTCTATG GCGGGACTGA TGGGACACAT GAGCGGCTCT TGGGGCAAGG CGCTGATCAG CGTCGGGCTT ATTGTTTCTG TGCTGGCCTC CTATGTGAGT TGGACTCTGT TCTCGGCAGA AGTGCCTTTC AGCGCAGCCC GCCACGGTGC TTTCCCTGCC ATCTTTTTGC GGCAGAATCG CAATGGCACG CCGATCGCTT CCCTCTGGTT ATCTAGCTTA ACAGTGCAGT TTTGTTTGAT ACTGGTGTGG CTGCTAGGTA AGGGGTATAC CAATCTGCTA CTCATTTCTA CGTCGATGAT TTTAGTGCCT TATCTATTGA TTGGACTGTT CCTGCTGAAG CTTTCTTTGA GTGGGCAGGG CAATGGGCTG ATGAGAGTCG TGGCGCTGGT GGCGAGCGGT TATGGACTCT GGCTACTCTA TGCCGCTGGT GTCGAGTATC TGTTGCTGTC CTTGCTACTT TACGGCCCCG GGTTACTCTT GTTTCTCTAC AGTCGCCGCC AAGTTGTTGA TGGTAAAAAG CTTAACGGAC GTGAGCGATT GCTAGCGGGG GCGACGTTGC TGAGTTTGTT CCCCGCGTTA TGGTCGTTTT GTTATCAATA G
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Protein sequence | MKENRIGLWS LTALVFSSMV GAGIFSLPQN MAEVAGVRAV LIGWGITGVG ILALAASFLY LSRLKPELDG GIYTYARAGF GELVGFFSAW GYWLCATIGV VGYLVIAFAA LGSFVDTPQQ VWFGEGNTLA AFIGESCILW AVHWLVSRGV QQAAMFNLVA TLAKSLPLLL FVLFACYYFD PVTFAQDQAA STLAVPVSEQ VRNTMLITLW VFTGIEGAAV LSARAKNKRD VGTATVLGVV LALLLYVLIS VLALGILARP ELAALPNPSM AGLMGHMSGS WGKALISVGL IVSVLASYVS WTLFSAEVPF SAARHGAFPA IFLRQNRNGT PIASLWLSSL TVQFCLILVW LLGKGYTNLL LISTSMILVP YLLIGLFLLK LSLSGQGNGL MRVVALVASG YGLWLLYAAG VEYLLLSLLL YGPGLLLFLY SRRQVVDGKK LNGRERLLAG ATLLSLFPAL WSFCYQ
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