| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1275 |
|---|
| Symbol | |
|---|
| ID | 7089838 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1506573 |
|---|
| End bp | 1507220 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643460180 |
|---|
| Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
|---|
| Protein accession | YP_002357207 |
|---|
| Protein GI | 217972456 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG1225] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.795815 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.025666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATCA TACTAAAAAC ACTTTGCCTC GCTGGCACTT TATTGCTCAC TAGCTTTACG
ACTCTGGCGC AGCCCATTGC CAGAGATGAG TTTTCCATCA GCCCGCTACT CAATGGTCAG
CAAATTCCTA AGGTAAACTT GCAAGATATC AAGGGTAAAA CCGTCGATTT AGCCGAATTA
ACCCAGCAAA AACCGACCAT CTTTTTCTTT TACCGCGGCG GCTGGTGCCC ATTTTGTAAC
AATCAAATGG GACAGTTAAA AGCGATTGAG CCAGAATTAT TAAAAATGGG CTTTCAGTTA
GTGGGTATTT CACCCGATAC ACCAGCTCAA CTTAAGGCTT CGGCGGCAAA AAATGAGCTT
AAGTATCTGC TGCTTTCCGA TGAAAAAATG CTGGCAGCGC AAGCCTTTGG CTTAGCTTTT
TACACAAGCG AAAAGGTCAC TGAGATTTAT ACTTCGCGTC TTCATGTTGA TAATCCAATG
TGGACGACTC CCGAGGGAGC CAAGCGTTTA GTCTTACCTG TGCCCGCCAT TTATATTAGC
GATGATAAAG GTTTGATTCA TTTCCAATAT GTTAATCCTA ACTACAAGGT CAGACCCGCA
CCTAAACTGA TCTTAACCGC CGCAAGTTTG GTGGGATCGC AAGAATAA
|
|---|
| Protein sequence | MSIILKTLCL AGTLLLTSFT TLAQPIARDE FSISPLLNGQ QIPKVNLQDI KGKTVDLAEL
TQQKPTIFFF YRGGWCPFCN NQMGQLKAIE PELLKMGFQL VGISPDTPAQ LKASAAKNEL
KYLLLSDEKM LAAQAFGLAF YTSEKVTEIY TSRLHVDNPM WTTPEGAKRL VLPVPAIYIS
DDKGLIHFQY VNPNYKVRPA PKLILTAASL VGSQE
|
|---|
| |