Gene Sbal223_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1269 
Symbol 
ID7089832 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1500111 
End bp1500755 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID643460175 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_002357202 
Protein GI217972451 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00137493 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATTACCA GAAGAGGAAT ACTTAAAAGC AGTATGGGCG TTGCTGTCGG TACTGTATAT 
CACGGGACAC TGATTAGCTT TCTTACCGGT TGTGGCAGCG ACAATGACAG TCAGGAAGTC
GTAGAAGTCA TGGCCGGTGG TTTAATGGTG GTCAACCCTG TGGTGTGTGT GAGTTGTCGA
CGCTGCGAGA TTGCCTGCAG CTGGAACCAC GAGGGCGACA GTAGTCCAAC GCTGGCGCGC
GTAAAAGTCG AACATAACAT GAACTTCGGC CCGCATGGCA TGCAATTCAA CTATCACATA
CAGCATGGCG AATGCGGTGA TGGCACCATA ATTCCTGCCA CTTGCCGCCA ATGTGAAGTT
TGTGCACAAG TGTGCCCGCA ACAGGCTATT TCAACCAACC CGCTAACCGG CGCCAAAGTG
GTTGATGAAG AACTCTGTGT TGGATGTGGT TATTGTGCGG ATAAATGTCC GCAGCAAGTG
ATTAAAGTCG TCCGCAGTAA AATGAAAGCC GTGAAATGCG ATTTATGCAA TGGCCAGCCT
GCTTGTGCTC AAGTTTGTCC TACTGGGGCA ATTAAATTTT ATCCTTGGGA TGAAGCCGAA
GCTGCATTAG AACAATATGA AAAATATACC GGCTTAGTTT CTTGA
 
Protein sequence
MITRRGILKS SMGVAVGTVY HGTLISFLTG CGSDNDSQEV VEVMAGGLMV VNPVVCVSCR 
RCEIACSWNH EGDSSPTLAR VKVEHNMNFG PHGMQFNYHI QHGECGDGTI IPATCRQCEV
CAQVCPQQAI STNPLTGAKV VDEELCVGCG YCADKCPQQV IKVVRSKMKA VKCDLCNGQP
ACAQVCPTGA IKFYPWDEAE AALEQYEKYT GLVS