Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1258 |
Symbol | |
ID | 7089821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1487944 |
End bp | 1489056 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460164 |
Product | permease YjgP/YjgQ family protein |
Protein accession | YP_002357191 |
Protein GI | 217972440 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000016572 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.000115983 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGATTGTAT TTAAATACCT TATTCGAGAA GTTTTAAAGG CACAAATTGC GGTACTTTTA GTGCTGTTAA CTATTTTTAT TAGCCAGCAT TTCGTGCGTA TACTGGCCGA TGCCTCCGAC GGCGATTTTC CCGCCTCTTT AATCATGACC CTGATTGGGC TTAACTTGCC TTATCTGGTT ATCTTAGTCC TGCCGTTAAG TTTGTTCTTG GGGATTTTAC TAGCCCATGG CCGTATGTAT TCCGAAAATG AGATGGTCGT TCTCCACGGT GTTGGGGTCA GTGAGTGGTA TGTCACCCGC GTGACGCTGA TTCTTGCCGT GATCAATATG TTGTTTACCG GCTATTTATC CCTTTATGTC GCCCCTTGGG CTGAAGAGCA GCAAAACCAA GTGCTCGAAA AAGCCCAGTC CGAAGCTGGG CTTGCGGCCT TAGTGCAAGG TCGTTTTCAG GCGAGTCCGA ATGGCCGCGC GGTATTATTT GTTGAACGTA TCGGTAAAGA CAACGAGTTA GATAAAGTGT TTGTGGCCCA GTTGCCAGAC CCTGATGACG AAACCGGCGT CACCAATGTG GTGGTGGCCA AAGGTGGGCG AGTGCAGGAA GATAGTTCAG GCGCGCAGCA ATTGAACCTC AATGATGGCG TGCGTTATCA AGGCAGCCCG AAGGCGAAGG ACTACCAAAT GATCGAATTT GGTGGTTATA AAATGCAAAT TAAAGAGCAG CAAGTCGACG AGCGTCGGCG TAAGTTATCT GCGCTGCCTG TCGATGAACT CGTGAAAATC GAAGGGGCGG AAGCCGTTGC CGAATTCCAT TGGCGTCTTG CCATTCCACT GGCGATTCCG ATCATGACCT TGATTGCGGT GCCTCTGGCG CGGGTGAATG TGCGTCAGGG CAAGTTCGCT AAAATGTTCC CAGCAGTACT CTTGTACCTT GGCTATTTTG GCCTCATGGT CGCCGGACGT AAGGCATTGC AAGATGGGAT TATTCCACTG TATTTAGGCA TGTGGTGGAT CCATATTTCG GCGCTCTTGA TGGGGCTGTT CTTGCTCGGC AAAGATAGGC CTATATTTAG TCGTATCTCG ACCCTGTTTG CCCATAAGAA GGTGGCGGCA TGA
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Protein sequence | MIVFKYLIRE VLKAQIAVLL VLLTIFISQH FVRILADASD GDFPASLIMT LIGLNLPYLV ILVLPLSLFL GILLAHGRMY SENEMVVLHG VGVSEWYVTR VTLILAVINM LFTGYLSLYV APWAEEQQNQ VLEKAQSEAG LAALVQGRFQ ASPNGRAVLF VERIGKDNEL DKVFVAQLPD PDDETGVTNV VVAKGGRVQE DSSGAQQLNL NDGVRYQGSP KAKDYQMIEF GGYKMQIKEQ QVDERRRKLS ALPVDELVKI EGAEAVAEFH WRLAIPLAIP IMTLIAVPLA RVNVRQGKFA KMFPAVLLYL GYFGLMVAGR KALQDGIIPL YLGMWWIHIS ALLMGLFLLG KDRPIFSRIS TLFAHKKVAA
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