| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1245 |
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| Symbol | |
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| ID | 7088017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1470332 |
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| End bp | 1471312 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 643460151 |
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| Product | RNA polymerase, sigma 70 subunit, RpoD subfamily |
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| Protein accession | YP_002357178 |
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| Protein GI | 217972427 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02394] RNA polymerase sigma factor RpoS
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.411027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000310525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAGCCGCA TAAAAAGCAC TGCCGCAGAA GCACTAGTAG ATTTATCCGT AGACACTGTT
GACTTCGATC TTGAAAAAGA AGAAGTTGCA TCCGATTTAG TTCAAGAGCT AGGAATAGAA
CAACAGGTTC AAGATGACCT ACAAAAAAAT CTTGATGCCA CTCAACTTTA CCTTGGTGAG
ATTGGTTTTT CCCCACTGCT TAGCGCAGAA GAAGAAGTTT ACTTTTCCCG TAAAGCCTTA
AAAGGCTGTG CAAAATCCCG TAATCGCATG ATCGAAAGTA ATTTACGTCT GGTCGTAAAG
ATTGCCCGTC GTTACAACAA TCGCGGCTTA GCACTGCTTG ATCTTATCGA AGAAGGCAAC
TTAGGCTTAA TTCGTGCTGT TGAAAAGTTT GATCCAGAAA GAGGTTTCCG TTTTTCAACC
TACGCGACTT GGTGGATCAG ACAGACCATT GAGCGCGCCA TTATGAATCA AACTCGTACT
ATTCGATTGC CTATTCATGT TGTTAAAGAA CTCAATGTTT ACTTGCGCAC CGCTCGCGAG
TTAGCACAAA AACTCGATCA CGAACCAACG GCTGAAGAAA TTGCCGAAAA ACTACAAGTG
TCGAGTGCAG ATGTCAGCCG TATGCTTAAG CTGAATGAGA AAATCACCTC TGTCGATACG
CCTTTGGGGG GCGATAATGA CAAGGCGTTG CTGGATATTT TAGCCGATGA CGATAACGTT
GGCCCTGACT ATAAAGTGCA AGATGAAGAT ATTTCTAATT CAGTGGTCAA ATGGCTCAAT
GAGTTAAACA CTAAACAAAG AGAAGTGTTA GCCCGCCGTT TTGGTCTGTT AGGTTATGAA
CCTTCTACAC TCGAAGATGT GGGTGCTGAA ATTGGTTTGA CTCGTGAACG TGTACGTCAA
ATCCAAGTAG AAGCATTGAA ACGTTTACGC GACTTATTAG GATCTCAAGG TTTATCTGTT
GAAGCATTAT TTCGAAACTA A
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| Protein sequence | MSRIKSTAAE ALVDLSVDTV DFDLEKEEVA SDLVQELGIE QQVQDDLQKN LDATQLYLGE
IGFSPLLSAE EEVYFSRKAL KGCAKSRNRM IESNLRLVVK IARRYNNRGL ALLDLIEEGN
LGLIRAVEKF DPERGFRFST YATWWIRQTI ERAIMNQTRT IRLPIHVVKE LNVYLRTARE
LAQKLDHEPT AEEIAEKLQV SSADVSRMLK LNEKITSVDT PLGGDNDKAL LDILADDDNV
GPDYKVQDED ISNSVVKWLN ELNTKQREVL ARRFGLLGYE PSTLEDVGAE IGLTRERVRQ
IQVEALKRLR DLLGSQGLSV EALFRN
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