| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1239 |
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| Symbol | ispD |
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| ID | 7088011 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1465408 |
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| End bp | 1466199 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643460145 |
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| Product | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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| Protein accession | YP_002357172 |
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| Protein GI | 217972421 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0490537 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000806727 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTCAGAGC TAGGACATTT AGATCTTGGA TTAAGCGAAC AATCCAATCC AGGCAGTCAA
TCTGAGCCGG TAATGCAAAC TGAATTGCAG CGCCAAGCTG AGCATATCAC TCAAGCTGTG
GTGGCTATCG TTCCCGCTGC GGGCATTGGT AGCCGCATGG GCGCCGACAG ACCAAAACAA
TATCTTGAAG TGTGCGGCCA GAGTATTCTC GGCCATACTT TAGATAAGCT GTTGTCTCAC
CCGAACATTT CCCACGTCAT CGTCGCCTTA CATCCGAATG ATACTATCTT CAATACCTTG
CCACAGGCCG TGCATCCCAA ATTGACCACA GTATTAGGCG GCGGTGAGCG CGCAGATTCT
GTGTTGGCGG CGCTGCAAAT TGCGCCCGAG CAGAGTTGGG CCTTAGTGCA TGATGCGGCA
AGACCTTGTT TAACCGCGAC GGATATCGAC AAGTTACTCG CATCCAGAGT GCAATTTCCC
CAAGGCGCGA TTTTGGCCAT GCCAGTACGC GATACTATGA AGCGCGCCAA TAAACAGGGC
GAAATCAGCG CTACTGTGTG CCGCGATAAT TTATGGCATG CATTAACGCC GCAGTTATTT
CCGGCAGCGC AACTAAAAGA TTACCTCAAT GCCGCTCTAG CGGCAGGCGC GGTCGTGACA
GATGAGGCTT CGGCGATGGA ATGGGCGGGC ATTTCACCTG GACTCGTTTC GGGCCGTGCT
GACAATATAA AAGTGACGCA TCCCGATGAT TTGGGATTGG CCGAATTGTT TTTAATGCGT
GCCGCAAAAT AG
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| Protein sequence | MSELGHLDLG LSEQSNPGSQ SEPVMQTELQ RQAEHITQAV VAIVPAAGIG SRMGADRPKQ
YLEVCGQSIL GHTLDKLLSH PNISHVIVAL HPNDTIFNTL PQAVHPKLTT VLGGGERADS
VLAALQIAPE QSWALVHDAA RPCLTATDID KLLASRVQFP QGAILAMPVR DTMKRANKQG
EISATVCRDN LWHALTPQLF PAAQLKDYLN AALAAGAVVT DEASAMEWAG ISPGLVSGRA
DNIKVTHPDD LGLAELFLMR AAK
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