| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1219 |
|---|
| Symbol | |
|---|
| ID | 7087991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1436466 |
|---|
| End bp | 1437428 |
|---|
| Gene Length | 963 bp |
|---|
| Protein Length | 320 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643460128 |
|---|
| Product | Auxin Efflux Carrier |
|---|
| Protein accession | YP_002357155 |
|---|
| Protein GI | 217972404 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0781123 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.077527 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTT TAACCCCTCT GTTTGCCGTC TTCGGGATCA TGTTGCTCGG CACACTAGTG
CAAAAATTAA AACTCTTGCC CGTCGATACG GATCAAGTAC TAAACCAATA TGTGTACTAT
ATTGCGTTCC CTGCGATCAT GCTTATCGCC CTCGCCCAGC AGCCGATTAA TGAAATTTTG
CAATGGGGAT TTATTGCGGG CTACAGCACG GCTATGGTGA TCACTTATCT TGTCTGCCTT
GGGCTCTCGC TGCTTGCTAA CCCTAAACAG CATGCGGTTG CCGCCATTCG AGCCCTTAAT
GCCACCTTTG GTAATACGGC ATTTATTGGT ATTCCACTGC TTATCATCTT ATTCCCGCAG
CAGCAAAGTG CGTTAGTCGC TGCCGCGATT GCCAGCTTAT TATCCGTGCT GATGTTTGCC
ATCGCCTTAG TCTCGATGGA ACTGGCCACT AACACCCAAA GACAACACCA CGCCTTAGTC
ATAATGGCGA TGGCGGTCGG TAAAAACCCT ATTGTTATTG GTAGCTTGAT TGGCGTCGGC
ATTTCGGCAC TAGAGATAAA ACTGCCTTCA GGGCTGGCGC TAATGATCCA GCAAATTGGC
AACACCTCAA GCCCGTGCGC GCTGTTTGCC ATCGGTATGG TGCTCGCCAA AGCGATGCGC
TACCAGAAAG ATAGCAGCGT ATTTAGCCCC AAGAATTTTA TCGAACTGAG CCTTATCAAT
CTCTTCAAGC TAATTGTCCA ACCAGCACTC GTCTACTTTA TGCTTAGCCG TTTTGGCGTG
AGCGGCGACT ACCTGATCAT GGGCGTGATC TTGAGCGCAC TGCCCACAGC CGCTAGCGTG
TACTTGCTTG CCCAGCGCTA TAACACTCAA GCTTCAACCA GTGCTCAGGG CATTCTATTT
GGCACCTTAG TTACTTTCTT TAGTTTGCCT ATCTTAGAAA GCTTAGTAAG AACCTACGCA
TAA
|
|---|
| Protein sequence | MTILTPLFAV FGIMLLGTLV QKLKLLPVDT DQVLNQYVYY IAFPAIMLIA LAQQPINEIL
QWGFIAGYST AMVITYLVCL GLSLLANPKQ HAVAAIRALN ATFGNTAFIG IPLLIILFPQ
QQSALVAAAI ASLLSVLMFA IALVSMELAT NTQRQHHALV IMAMAVGKNP IVIGSLIGVG
ISALEIKLPS GLALMIQQIG NTSSPCALFA IGMVLAKAMR YQKDSSVFSP KNFIELSLIN
LFKLIVQPAL VYFMLSRFGV SGDYLIMGVI LSALPTAASV YLLAQRYNTQ ASTSAQGILF
GTLVTFFSLP ILESLVRTYA
|
|---|
| |