| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1211 |
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| Symbol | |
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| ID | 7087983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1428982 |
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| End bp | 1430136 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643460120 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_002357147 |
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| Protein GI | 217972396 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.558913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTGA ACATAAGTTG GTCCGTACTC GATACCCAAA TGATGAGCCG CGCGATTCAA
TTGGCGCGCA AAGGCTTTTA CACCACGAGA CCCAATCCCA GTGTGGGCTG CGTTATCGTT
AAAGATAATC AGATCGTCGG CGAAGGTTAT CATCAAAAAG CGGGTGAGCC CCACGCCGAA
GTGCATGCAC TACGTATGGC TGGCGAACAC GCCCGCGGCG CAACGGCCTA TGTCACCTTA
GAGCCCTGCA GTCATTATGG CCGCACGCCG CCCTGCGCCT TGGCACTGAT CAATATTGGC
GTTAAGCGTG TGGTGGTGGC GGTTGAAGAT CCAAATCCGC AAGTGGCTGG TCGCGGTATT
CAAATGCTGC GCGACGCCGG TATTGAAGTG GATGTGGGAT TACACCGCGA TGAAGCCTAT
GCCTTGAATT TAGGCTTTAT GAAGCGCATG GAATCGGGTT TACCCAGAGT TACAGTCAAA
TTGGCTGCGA GTCTCGATGG TAAAACCGCG CTGTCTAACG GTGTGTCTAA ATGGATTACC
GGGCCTGAAT CTCGCCGCGA CGTGCAGCGC TTACGCTTAC GTTCCTGCGC TTTGGTCACT
GGGATTGAAA CCATACTGGC TGACGATCCC TCACTCAATG TGCGATATCA AGAACTTGGC
GGCATAAAAG ACAGCGTAAC CGAGGCGCAA TTACTGCAGC CATTAAGAGT GATACTCGAC
AGTCGCGCCC GTTTGCCGTT ATCGGCTGCC TGTTTGGCTA TCGTATCGCC GATAATCTTG
GTCTCGACCG TGGCTTATCC CGCAGAGTTT CAAGCACAAT TGCCCTCCCA TGTGAGTTGC
CTCGTGTTAC CTGCTATTGC AGGTCGCGTA TCCTTACCTG AACTATTAAG CTATTTAGGC
CAAAGTTGTA ATCACGTGCT GGTGGAAGCG GGTGCAACCT TAGCGGGCGC TTTTTTAGCG
CAGGGGCTGG CCGATGAATT AGTGCTGTAC CAAGCGATGA AAATCCTCGG TGGGCAAGGG
CGTAATCTAT TGCAGCTACC CGATTATCAA ACCATGGCGC AAATTCCTGC ATTAATGTTG
GTCGATGAGC GCAAATTAGG GCCAGATACC CGTTTAATCT TGAGCGTTAT GCTTGATACT
TCTTTAATTA ATTAA
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| Protein sequence | MSLNISWSVL DTQMMSRAIQ LARKGFYTTR PNPSVGCVIV KDNQIVGEGY HQKAGEPHAE
VHALRMAGEH ARGATAYVTL EPCSHYGRTP PCALALINIG VKRVVVAVED PNPQVAGRGI
QMLRDAGIEV DVGLHRDEAY ALNLGFMKRM ESGLPRVTVK LAASLDGKTA LSNGVSKWIT
GPESRRDVQR LRLRSCALVT GIETILADDP SLNVRYQELG GIKDSVTEAQ LLQPLRVILD
SRARLPLSAA CLAIVSPIIL VSTVAYPAEF QAQLPSHVSC LVLPAIAGRV SLPELLSYLG
QSCNHVLVEA GATLAGAFLA QGLADELVLY QAMKILGGQG RNLLQLPDYQ TMAQIPALML
VDERKLGPDT RLILSVMLDT SLIN
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