Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1198 |
Symbol | |
ID | 7087970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1411923 |
End bp | 1412690 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460107 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_002357134 |
Protein GI | 217972383 |
COG category | [K] Transcription |
COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTTTA TTCTACCTGA ACAGCAATTT AATCCAGACC AGCTGGATAA TCTGGTCATT GGCATTGCCG CAGATATGGG CGAGCACGAC TCGGGAGTGC ATTACCACAG AAAAGCACAA CTGCTGTACG CCCCCACTGG CGTGATGAGA TTCACCCTAG CCGATACTCA AATGGTGTTA CCGCCAACGC GTGCGGCTTG GTTGCCAGCT GGCGTTAAGC ACAGCGTCAC CATGCGTAAT GTGGTTGCCT ATCGCTCACT CTACTTTGAA CCAGAAACTG TCACTTCATT GCCCGATAAA GTCACTATTT TCCATATAAA CCCGCTACTC AAAGCGTTAA TCGACACTAT GTCGTTTTGG CCTTGGGACA AACCAAGAAG CACTCAGCAC AATGCCTTTT TGCTGCTCTG CGAAGAATTG GGCCATGCCG CGGAAGAAAA TCTGGCTTTA CCCCTCCCAC AGGATAAACG TTTAAAAACC TGGCTTGCGC AACTGCAACA GCACCAAAAA CCGCCAGCCA ATCTTAAGGA TATGGCAGTA GAAATCGGAG CCAGTGAACG CACAATTAGC CGCATTTTTA GCGCACAGAC GGAAATGGCT TATCAAGCAT GGCGCCAGCA ATGGCGTTTA CTCTCGGCCA TTGAACAATT GGCGGCGGGG GCATCGGTAG CGCAGGTGGG CTTTAATTTA CAATTTTCCA GTGACAGTGC CTTTATCAGC TTTTTTAAGC AATATACCGG CACCACACCG GCACAATATT TCAAATAA
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Protein sequence | MAFILPEQQF NPDQLDNLVI GIAADMGEHD SGVHYHRKAQ LLYAPTGVMR FTLADTQMVL PPTRAAWLPA GVKHSVTMRN VVAYRSLYFE PETVTSLPDK VTIFHINPLL KALIDTMSFW PWDKPRSTQH NAFLLLCEEL GHAAEENLAL PLPQDKRLKT WLAQLQQHQK PPANLKDMAV EIGASERTIS RIFSAQTEMA YQAWRQQWRL LSAIEQLAAG ASVAQVGFNL QFSSDSAFIS FFKQYTGTTP AQYFK
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