Gene Sbal223_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1179 
Symbol 
ID7087951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1389888 
End bp1390868 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID643460088 
Productresponse regulator receiver modulated CheW protein 
Protein accessionYP_002357115 
Protein GI217972364 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAAA TAAAAAAATC AGAAATATTG ACCGAAAGTG GCACAAATGA ACTCGAAATT 
ATTGAGTTTC ATCTGCATAA GATACTCCCT AATGGAGGCC ATAAAGTGTG TCATTACGGG
ATCAATGTCG CCAAAGTGAG GGAAGTGATT AGGGTGCCAG AAACCTCAGA TTATCCCAAT
GCTCAGCCGC ACATGGTGGG GGTGTTCTCG TTGCGAGAAA AGCTGATCCC TTTAGTCGAT
CTTGCCGGTT GGCTCGGGAT CTCTACACCG GAGGATTTAA CTCACAAAGT CGTTATCGTC
ACTGATTTTA ATAAGATGAT TAATGGTTTC TTAATAGATA GCGTTCGTAG CATTCATCGT
GTGTCGTGGG AGCAAGTTGA ATCACCGAGT CAATTTTTAG AAGCGGGTGA AAATGATTGT
GTCGTTGCTG TGGTTCGCCG TGATGGCATG CTGATTATGA TATTGGATTT TGAGAAGATT
ATTGCCGATA TCAATCCTGA ACTGAGTATG GATAAGTACG ATGTCACGCT CGATAGGAGT
GTGCTGATTA ATGACAAAAT GCTGGCAAAA CGTGAAGCGA AAACGATTTT AATCGTCGAT
GACTCAGCCT TCATTCGCAA AATGATTGAA AATACGCTCC GCAGCGCAGG CTACAACATT
ATCACCGCTA AAGATGGTGG TGATGCTCTT GAAATGCTAA TGGAATTTGA GAGCCTGGCT
GAGCAAGATA ATGCCTCTAT TTCTGATTTT GTCAGTGCTG TTATCACGGA CGTTGAAATG
CCTCGCATGG ATGGCATGCA TCTGGTTAAA CGATTAAGAG AATCCAAGGC ATACCAACAA
ATGCCGATTG TGATGTTTTC TTCCTTAATG AGCGAGGATA ACCGCACAAA GGCGATGGCA
TTGGGGGCAA ATGACACTAT TACTAAACCA GAAATTGGCC GTATGGTCGG TATGATAGAT
AAATACGTAT TCGAAGAGTA A
 
Protein sequence
MSEIKKSEIL TESGTNELEI IEFHLHKILP NGGHKVCHYG INVAKVREVI RVPETSDYPN 
AQPHMVGVFS LREKLIPLVD LAGWLGISTP EDLTHKVVIV TDFNKMINGF LIDSVRSIHR
VSWEQVESPS QFLEAGENDC VVAVVRRDGM LIMILDFEKI IADINPELSM DKYDVTLDRS
VLINDKMLAK REAKTILIVD DSAFIRKMIE NTLRSAGYNI ITAKDGGDAL EMLMEFESLA
EQDNASISDF VSAVITDVEM PRMDGMHLVK RLRESKAYQQ MPIVMFSSLM SEDNRTKAMA
LGANDTITKP EIGRMVGMID KYVFEE