| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1141 |
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| Symbol | deoA |
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| ID | 7087594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1342473 |
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| End bp | 1343804 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643460052 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_002357079 |
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| Protein GI | 217972328 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02643] thymidine phosphorylase
[TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000198917 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTCTAG CTCAAGAGAT TATTCGTAAA AAACGTAATG GTTTAGCGCT AAGTTCCGAA
GAAATACAGT TCTTTGTTCA AGGTATTACC ACCAACTCCG TATCTGAAGG TCAGATCGCC
GCATTAGGCA TGGCGGTGTA TTTTAATGAC ATGAATATGG ATGAAAGAAT CGCTTTAACG
ACAGCAATGC GTGATTCTGG CACTGTGCTT AATTGGCAAT CATTGGGACT CAACGGTCCA
GTTATCGACA AACACAGCAC TGGTGGTGTC GGCGATGTGA TTAGTCTCAT GCTTGGCCCT
ATGGCTGCGG CTTGTGGCGG TTATGTGCCT ATGATTTCTG GGCGCGGCCT AGGTCATACT
GGCGGTACAC TCGATAAGTT TGATGCCATT CCGGGTTACC AAACAGAGCC TTCAAGTGAA
TTGTTCCGCA AAGTGGTTAA AGATGTCGGG GTGGCGATTA TTGGCCAGAC GGGCGATCTC
GTTCCAGCCG ATAAACGCTT CTATTCTATT CGCGATAATA CCGCCACCGT TGAATCCATT
TCCCTCATCA CAGCATCGAT TTTGTCTAAG AAATTAGCCT GTAATTTAGA TGCGTTGGCG
ATGGACGTAA AAGTCGGTAG CGGCGCTTTC ATGCCAACCT ATGAGGCATC TGAAGAATTA
GCTCGCAGTA TTGCAGCTGT TGCTAATGGT GCGGGTACTA AAACGACGGC TTTACTTACC
GACATGAATC AAGTGCTTGC ATCTTGTGCA GGTAACGCGG TTGAAGTGAA AGAAGCCATC
GACTTTTTAA CGGGTGCTTA CCGTAACCCG CGTTTATATG AAGTCACTAT GGGTCTTTGT
GCTGAGATGC TGCTCCTTGG CGGTCTTGCA AGCAATGAAG CCGATGCTCG CGCTAAACTG
AATCGTGTAC TCGACAATGG TCGCGCTGCA GAACTCTTTG GCAAGATGGT GTCGGGTCTT
GGTGGTCCGG TTGATTTTGT TGAAAACTAC AGTAAATACC TGCCGCAGTC ACAAATTATT
CGTCCCGTCT TTGCCGATAT GCAAGGTTAT GCCTATAGCA TGGATACCCG TGAGTTAGGT
TTAGCGGTTG TGACCTTAGG TGGCGGCCGC CGTAAGCCCG GCGATGCACT AGACTATAGT
GTTGGCTTAA CCCAAGTGTG TGCCCTAGGC GATAAAGTGG ATTCATCGAC GCCGATTGCC
GTTATCCATG CACAATCTGA AGCCGCGTTC GCAGAAGCTG AACTTGCGGT GAAAAAAGCG
ATTCACATTG GTGAAACCGC TCCAGAAAAA ACACCTGAGA TCTATGCCTA TATTCGTGCA
TCGGATCTTT AA
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| Protein sequence | MFLAQEIIRK KRNGLALSSE EIQFFVQGIT TNSVSEGQIA ALGMAVYFND MNMDERIALT
TAMRDSGTVL NWQSLGLNGP VIDKHSTGGV GDVISLMLGP MAAACGGYVP MISGRGLGHT
GGTLDKFDAI PGYQTEPSSE LFRKVVKDVG VAIIGQTGDL VPADKRFYSI RDNTATVESI
SLITASILSK KLACNLDALA MDVKVGSGAF MPTYEASEEL ARSIAAVANG AGTKTTALLT
DMNQVLASCA GNAVEVKEAI DFLTGAYRNP RLYEVTMGLC AEMLLLGGLA SNEADARAKL
NRVLDNGRAA ELFGKMVSGL GGPVDFVENY SKYLPQSQII RPVFADMQGY AYSMDTRELG
LAVVTLGGGR RKPGDALDYS VGLTQVCALG DKVDSSTPIA VIHAQSEAAF AEAELAVKKA
IHIGETAPEK TPEIYAYIRA SDL
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