Gene Sbal223_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1140 
Symbol 
ID7087593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1341518 
End bp1342288 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content48% 
IMG OID643460051 
Productdeoxyribose-phosphate aldolase 
Protein accessionYP_002357078 
Protein GI217972327 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0274] Deoxyribose-phosphate aldolase 
TIGRFAM ID[TIGR00126] deoxyribose-phosphate aldolase
[TIGR00148] UbiD family decarboxylases 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0121446 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000107327 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGATT TAAAAAAAGC AGCACAACGC GCCATCGAGT TAATGGACTT AACGACTTTG 
AATGATGACG ACACAGATCA AAAAGTGATA GACCTGTGCC ACAAAGCGAA AACGGCTGCG
GGCAATACTG CCGCTATCTG CATTTACCCA CGTTTCATCC CAATTGCACG TAAGACACTC
GATGAAATCG GTGCTGAAGA TATCCAAATC GCCACTGTGA CTAACTTCCC CCATGGCAAC
GATGACATTG CCATTGCTGT ACTCGAAACC CGCGCTGCCG TTGCCTATGG TGCCGACGAA
GTTGACGTGG TATTCCCATA CCGTGCGCTG ATGGAAGGCA ATGAAACGAT TGGTTTTGAA
TTAGTTAAAG CCTGTAAAGA AGCCTGTGGT GAAGTCTTGT TAAAAGTCAT CATCGAATCT
GGCGTGTTAG CTGATCCTGC GCTTATCCGC CGTGCATCTG AGCTTTCAAT CGATGCGGGT
GCTGACTTTA TCAAAACTTC TACGGGTAAA GTGCCTGTAA ACGCCACACT CGAAGCGGCT
GAGATCATGT TAACTGTGAT CAGCGAAAAG AATACCCAAG TAGGCTTCAA GCCTGCCGGT
GGTGTGCGTG ATGCTGCACA AGCGGCTGAG TTCCTCGGAG TTGCTGAGCG TATTTTAGGG
GCTGACTGGG TTTCACCGCG TACCTTTAGA TTTGGTGCTT CAAGCTTATT AAACAGCTTG
CTGCACACAC TAGAACTGGC TGATGCGCCT AAGCCAACTC AAGGCTATTA A
 
Protein sequence
MTDLKKAAQR AIELMDLTTL NDDDTDQKVI DLCHKAKTAA GNTAAICIYP RFIPIARKTL 
DEIGAEDIQI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGNETIGFE
LVKACKEACG EVLLKVIIES GVLADPALIR RASELSIDAG ADFIKTSTGK VPVNATLEAA
EIMLTVISEK NTQVGFKPAG GVRDAAQAAE FLGVAERILG ADWVSPRTFR FGASSLLNSL
LHTLELADAP KPTQGY