Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1140 |
Symbol | |
ID | 7087593 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1341518 |
End bp | 1342288 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643460051 |
Product | deoxyribose-phosphate aldolase |
Protein accession | YP_002357078 |
Protein GI | 217972327 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0274] Deoxyribose-phosphate aldolase |
TIGRFAM ID | [TIGR00126] deoxyribose-phosphate aldolase [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0121446 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000107327 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACTGATT TAAAAAAAGC AGCACAACGC GCCATCGAGT TAATGGACTT AACGACTTTG AATGATGACG ACACAGATCA AAAAGTGATA GACCTGTGCC ACAAAGCGAA AACGGCTGCG GGCAATACTG CCGCTATCTG CATTTACCCA CGTTTCATCC CAATTGCACG TAAGACACTC GATGAAATCG GTGCTGAAGA TATCCAAATC GCCACTGTGA CTAACTTCCC CCATGGCAAC GATGACATTG CCATTGCTGT ACTCGAAACC CGCGCTGCCG TTGCCTATGG TGCCGACGAA GTTGACGTGG TATTCCCATA CCGTGCGCTG ATGGAAGGCA ATGAAACGAT TGGTTTTGAA TTAGTTAAAG CCTGTAAAGA AGCCTGTGGT GAAGTCTTGT TAAAAGTCAT CATCGAATCT GGCGTGTTAG CTGATCCTGC GCTTATCCGC CGTGCATCTG AGCTTTCAAT CGATGCGGGT GCTGACTTTA TCAAAACTTC TACGGGTAAA GTGCCTGTAA ACGCCACACT CGAAGCGGCT GAGATCATGT TAACTGTGAT CAGCGAAAAG AATACCCAAG TAGGCTTCAA GCCTGCCGGT GGTGTGCGTG ATGCTGCACA AGCGGCTGAG TTCCTCGGAG TTGCTGAGCG TATTTTAGGG GCTGACTGGG TTTCACCGCG TACCTTTAGA TTTGGTGCTT CAAGCTTATT AAACAGCTTG CTGCACACAC TAGAACTGGC TGATGCGCCT AAGCCAACTC AAGGCTATTA A
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Protein sequence | MTDLKKAAQR AIELMDLTTL NDDDTDQKVI DLCHKAKTAA GNTAAICIYP RFIPIARKTL DEIGAEDIQI ATVTNFPHGN DDIAIAVLET RAAVAYGADE VDVVFPYRAL MEGNETIGFE LVKACKEACG EVLLKVIIES GVLADPALIR RASELSIDAG ADFIKTSTGK VPVNATLEAA EIMLTVISEK NTQVGFKPAG GVRDAAQAAE FLGVAERILG ADWVSPRTFR FGASSLLNSL LHTLELADAP KPTQGY
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