| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1139 |
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| Symbol | |
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| ID | 7087592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1340245 |
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| End bp | 1341096 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 643460050 |
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| Product | nucleoside-specific channel-forming protein Tsx |
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| Protein accession | YP_002357077 |
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| Protein GI | 217972326 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3248] Nucleoside-binding outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000567301 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000471998 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGGGGTTGA TGATGAAAAA CGTTAAAACT TTAGCTTTAG CCGCTACTGC TGTAGCTGCA
ATCTCTGGCA ACGCATTTGC CGCTGATCGT ACTGATCTTC ACGGTACTGA TTACAAGTGG
ATGCAGTTCA ACGCTATGTA CTCTATCGGT GAAAAGCCAG ATAACCCAGC AACAGGCGAT
CAACACAACT ATTTAGAAAT GGAATTCGGC GGTCGTTCTG GCGTATTCGA TCTATACGGT
TATGTTGACG TATTCAACTT AGCAAACGAA TCAAGCAGTA ACGGCGACAA GAACCCAGGT
TCTGGCACAA GCAAAATTTT CATGAAGTTT GCTCCACGTG TCTCTATCGA TGCTTTGACT
GGTAAAGACC TGTCTTTCGG TCCAATCCAA GAAGTTTACT TCTCTACTCT GTTCAACTGG
GATGGTCTTA ACGGCGATGG CGTTAACTCT TCATTCTGGG GTGTTGGTGC TGACGTAAAC
GTGCCTTGGT TAGGTAAAAC TGGCATGAAC TTGTACGGTT TCTATGACCT GAACGCTAAA
GAATGGAACG GCTACCAGTT CTCTGCTAAC TGGTTCAAAC CTTTCTACTT CTTTGATAAC
AAGAGCTTCC TGTCATTCCA AGGTTACATC GATTACCAAT TTGGTGCTGA TGCGACTAAT
GACATTTATG TGCCTAAAAC CTCTAACGGC GGTAACATCT TCTTCGGCCT ATACTGGCAC
TCAGATCGTT ATGCTCTGGG CTATGGCTTG AAAGGCTTCA AAGACGTTTA TCTGCTTGAA
GATAAAGGCG GTATTGTTGG TTTAGAATCA ACAGGTTGGT CACACTACCT GACAGCTACT
TATAAGTTCT AA
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| Protein sequence | MGLMMKNVKT LALAATAVAA ISGNAFAADR TDLHGTDYKW MQFNAMYSIG EKPDNPATGD
QHNYLEMEFG GRSGVFDLYG YVDVFNLANE SSSNGDKNPG SGTSKIFMKF APRVSIDALT
GKDLSFGPIQ EVYFSTLFNW DGLNGDGVNS SFWGVGADVN VPWLGKTGMN LYGFYDLNAK
EWNGYQFSAN WFKPFYFFDN KSFLSFQGYI DYQFGADATN DIYVPKTSNG GNIFFGLYWH
SDRYALGYGL KGFKDVYLLE DKGGIVGLES TGWSHYLTAT YKF
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