| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1127 |
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| Symbol | nusA |
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| ID | 7087580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1324043 |
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| End bp | 1325542 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643460038 |
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| Product | transcription elongation factor NusA |
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| Protein accession | YP_002357065 |
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| Protein GI | 217972314 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000246453 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000000839394 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGAATAAAG AGATTCTGCT AGTCGCTGAG GCGGTTTCAA ATGAAAAGGC CGTTCCACGC
GAGAAAATTT TTGAAGCGCT AGAGATTGCT CTGGCCACAG CAACCAAGAA AAAATACGAA
GGTGATATTG ACGTTCGTGT TGCTATCGAC CGTAAAACCG GTGGTTATGA TACTTTCCGT
CGTTGGATGG TGGTTGATGA TCACGGTGAA GCGTTAGAAA ATCCTTACCG CGAAATCACG
TTAGAAGCGG CACGATACGA AAATCCAGAC ATCCAACCTG GCGAGTTTAT CGAAGACGAT
ATCGAGTCCG TGGTGTTTGA CCGTATTACC ACTCAAACCG CTAAGCAAGT GATCGTACAG
AAAGTACGTG AAGCTGAACG TGCTCAAGTG GTTGAACAGT TCCAAGATCA AGAAGGTGAG
TTAATCACTG GTATAGTCAA AAAAGCAACT CGCGAAAGCG TAGTGGTTGA CTTAGGTAAT
AACGCTGACG GCGTGTTGTT CCGTGAAGAT TTAATTTCAC GTGAATCTTT CCGTCCAGGC
GACCGCGTGC GTGCATTATT GTACTCAGTA CGTCCAGAAG CTCGCGGCGC ACAGTTATTC
TTAAGCCGTA CTAAACCTGA AATGCTGATC GAGCTTTTCC GTGTTGAAGT ACCTGAAATT
GCTGACGAAC TGATTGAAAT CATGGGCGCT GCTCGTGATC CAGGCGCGCG CGCTAAAATC
GCCGTTAAGT CGAATGACCG TCGTATCGAT CCAATCGGTG CGTGTGTGGG TATGCGTGGT
GCACGTGTAC AAGCCGTGTC GAATGAACTG GGTGGCGAAC GTGTTGATAT CGTGTTGTGG
GATGATAATC CAGCACAATA CGTGATCAAT GCCATGGCGC CAGCCGATGT TGCCTCTATC
ATAGTTGACG AAGATAACCA TTCTATGGAT ATCGCCGTTG AAGCCGATAG TTTGGCACAA
GCCATTGGAC GTAATGGCCA GAACGTACGT TTAGCGACAC AACTGACAGG TTGGGTTCTG
AACGTTATGA CAGTGGAAGA TATGAATAAG AAACACCAGG CAGAAAGTGC CAAGGTGGTT
GAATTATTCG TTAACTCACT GGATGTCGAT GAAGATTTTG CACAAGTACT GGCGGACGAG
GGCTTTACGT CGCTCGAAGA AGTTGCCTAT GTACCTGTGT CTGAACTATT GGCGATTGAC
GGTTTTGACG AAGATCTCGT TGAAGCCTTA CGTGAACGTG CAAAAGCAGC GATCTCAACT
CGAGCTCTCG CTACTGAAGA AGCACTGGAT GGTGTGGAGC CAAGTGAAGA GTTACTAGCA
CTTGAAGGTG TTGATAGACA CTTAGCCTAT GTTTTCGCTA GCAAAGGTAT TGTGACTCTA
GAAGACTTGG CTGAACAAGG CATTGATGAT TTGATCGAAA TTGAAGAATT GACAGAAGAA
AAAGCAGGTG AGCTCATCAT GGCAGCCCGC AATATCTGTT GGTTTGGCGA AGAAGCATAA
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| Protein sequence | MNKEILLVAE AVSNEKAVPR EKIFEALEIA LATATKKKYE GDIDVRVAID RKTGGYDTFR
RWMVVDDHGE ALENPYREIT LEAARYENPD IQPGEFIEDD IESVVFDRIT TQTAKQVIVQ
KVREAERAQV VEQFQDQEGE LITGIVKKAT RESVVVDLGN NADGVLFRED LISRESFRPG
DRVRALLYSV RPEARGAQLF LSRTKPEMLI ELFRVEVPEI ADELIEIMGA ARDPGARAKI
AVKSNDRRID PIGACVGMRG ARVQAVSNEL GGERVDIVLW DDNPAQYVIN AMAPADVASI
IVDEDNHSMD IAVEADSLAQ AIGRNGQNVR LATQLTGWVL NVMTVEDMNK KHQAESAKVV
ELFVNSLDVD EDFAQVLADE GFTSLEEVAY VPVSELLAID GFDEDLVEAL RERAKAAIST
RALATEEALD GVEPSEELLA LEGVDRHLAY VFASKGIVTL EDLAEQGIDD LIEIEELTEE
KAGELIMAAR NICWFGEEA
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