Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1109 |
Symbol | |
ID | 7087562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1304619 |
End bp | 1305206 |
Gene Length | 588 bp |
Protein Length | 195 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 643460020 |
Product | peptidyl-tRNA hydrolase |
Protein accession | YP_002357047 |
Protein GI | 217972296 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0193] Peptidyl-tRNA hydrolase |
TIGRFAM ID | [TIGR00447] peptidyl-tRNA hydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00116388 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.000000000970821 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAA TAAAATTAAT AGTTGGTCTG GCAAACCCTG GTGCTGAATA TGCGCACACT CGCCATAATG CGGGGGCTTG GTACGTACTA GAGTTGGCTC GAATTTGCGG CGTGACTTTA GTGGCCGACA GTAAGTATTT TGGTTTGACC GCCAGAGCCG TATTGCACGG TAAAGATGTC CGCTTATTGA TCCCGACGAC TTATATGAAT TTAAGTGGTA AAGCCGTGGG TGCTTTGGCG AACTTTTTTC GTATCACACC GGAAGAGATT CTGGTCGCTC ACGATGAACT CGATCTACCG CCCGGCGTGG CTAAGTTCAA GCTCGGTGGC GGTCATGGCG GCCACAATGG TTTGAAAGAT ATTATTGCTA AACTGGCTAA CGATAAAAAC TTCTACCGTT TACGCTTAGG TATCGGTCAT CCCGGTGATA AAAACCAAGT GAGTGGTTAC GTACTGGGAA AAGCACCTGC TAAAGAGCAA GAGCTTATCG ATGCGGCGAT AGATGAAGCC GTGCGTTCTA CCGAGATTTT GTTCAAGCAA GACATGGTGA AAGCCATGAA CAGATTACAC TCCTTTAAAG CGGAGTAG
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Protein sequence | MSEIKLIVGL ANPGAEYAHT RHNAGAWYVL ELARICGVTL VADSKYFGLT ARAVLHGKDV RLLIPTTYMN LSGKAVGALA NFFRITPEEI LVAHDELDLP PGVAKFKLGG GHGGHNGLKD IIAKLANDKN FYRLRLGIGH PGDKNQVSGY VLGKAPAKEQ ELIDAAIDEA VRSTEILFKQ DMVKAMNRLH SFKAE
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