Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1106 |
Symbol | |
ID | 7087559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1300819 |
End bp | 1302243 |
Gene Length | 1425 bp |
Protein Length | 474 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643460017 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002357044 |
Protein GI | 217972293 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.00000000160035 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTAAGA AACTCCATAT CAAGACTTGG GGCTGTCAAA TGAATGAGTA TGACTCATCC AAGATGGCTG ATCTGTTAGG CGAATACCAA GGTTATACCT TGACTGAAGA AGCGTCTGAG GCAGACATTC TCCTGCTGAA TACTTGTTCA ATCCGTGAAA AAGCGCAGGA AAAAGTGTTC CATCAGCTAG GACGCTGGAA GACGCTTAAA GATAAAAATC CCAATTTGAT TATTGGCGTG GGCGGCTGCG TTGCTTCACA AGAAGGCAAA GCGATTAAAG ACAGAGCCCA ATGTGTCGAC ATTATTTTTG GCCCACAAAC GTTGCACCGT CTGCCCGAGA TGATCGAGCA AGTGCGCCGT GGTGACAAAG CGGTTATCGA TATCAGCTTC CCTGAAATCG AAAAATTCGA CCGTCTGCCA GAACCCCGCG CCGAAGGCCC AACCGCGTTT GTGTCTATCA TGGAAGGTTG CAGCAAGTAC TGCTCGTTCT GTGTTGTACC TTACACTCGC GGTGAAGAAG TCAGCCGTCC ATCGGACGAC ATCATCCTTG AAATCGCCCA ATTGGCTGAG CAAGGTGTGC GTGAAGTGAA CCTGCTAGGC CAAAACGTGA ATGCCTATCG CGGCGCAACT CACGATGGCG CTATCTGTAC CTTTGCTGAG TTACTGCGTT TCGTGGCAGC CATCGACGGT ATCGATCGTA TCCGCTTCAC TACCAGTCAC CCGATTGAAT TTACACAAGA TATTATCGAC GTTTACGAAG ATACCCCAGA GCTAGTGAGC TTCTTACACT TGCCAGTACA ATCGGGATCT GACCGTATTC TCACGGCGAT GAAGCGTGGC CACATGGCGA TTGAATATAA GTCAATCATC CGCCGCCTGC GTAAAGCCCG TGAAGGCATT CAAATCAGCT CAGACTTTAT CATTGGCTTC CCTGGCGAAA CCAAAGAAGA CTTTGCTGAT ACCATGAAGT TGATTGAAGA CATAGGTTTC GACCACAGCT TCAGCTTTAT CTATAGCGCA CGTCCGGGCA CGCCAGCGGC GGATTTACCC GATAACGTCG ATATGGAAGA GAAAAAGCAA CGTCTGGCGA TTCTGCAAGA CCGCATCACC CAGCAAGCCA TGCGCTATAG CCGCCACATG ATGGGCACAG TGCAACGTAT TCTGGTTGAA GGTCCATCGG TGAAAAACCC AATGGAACTG CGTGGCCGTA CTGAGAACAA CCGAGTCGTG AACTTCGAAG GTCTGCCAAA ACATATTGGT ACTTTCGTGG ATGTCGAAAT CGTCGACGTA TACACTAACT CACTGCGCGG TGTCTTTATC CGCGGCGAAG ATGAAATGGA TCTACGTCGT AGCCTGCGTC CGGCTGAAAT TCTGGCCAAG CGCAAGCAAG ATGATGAACT GGGCGTGACT CAATTTAAGC CATAA
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Protein sequence | MSKKLHIKTW GCQMNEYDSS KMADLLGEYQ GYTLTEEASE ADILLLNTCS IREKAQEKVF HQLGRWKTLK DKNPNLIIGV GGCVASQEGK AIKDRAQCVD IIFGPQTLHR LPEMIEQVRR GDKAVIDISF PEIEKFDRLP EPRAEGPTAF VSIMEGCSKY CSFCVVPYTR GEEVSRPSDD IILEIAQLAE QGVREVNLLG QNVNAYRGAT HDGAICTFAE LLRFVAAIDG IDRIRFTTSH PIEFTQDIID VYEDTPELVS FLHLPVQSGS DRILTAMKRG HMAIEYKSII RRLRKAREGI QISSDFIIGF PGETKEDFAD TMKLIEDIGF DHSFSFIYSA RPGTPAADLP DNVDMEEKKQ RLAILQDRIT QQAMRYSRHM MGTVQRILVE GPSVKNPMEL RGRTENNRVV NFEGLPKHIG TFVDVEIVDV YTNSLRGVFI RGEDEMDLRR SLRPAEILAK RKQDDELGVT QFKP
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