| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1096 |
|---|
| Symbol | |
|---|
| ID | 7087549 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1290192 |
|---|
| End bp | 1291223 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 643460007 |
|---|
| Product | DNA polymerase III, delta subunit |
|---|
| Protein accession | YP_002357034 |
|---|
| Protein GI | 217972283 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1466] DNA polymerase III, delta subunit |
|---|
| TIGRFAM ID | [TIGR01128] DNA polymerase III, delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00712318 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000000000697762 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGTCT ATCCCGATCA ACTCTCCCGC CACCTTAACC AGTTATTTCC TTGTTATCTG
ATTTTTGGTG ATGATCCTTG GTTGATTGAA ACCACCAAAG ATCAGATACG CCAATTTGCC
AAGCGTCAGG GTTTCGATGA AAAAGTCCAA CTCATTCAAG AGACGGGCTT TAATTGGAAC
GACTTGACTC AGGAATGGCA GGCCATGAGC CTGTTTTCCA GTAAGCGTCT GATTGAGTTA
ACCCTTCCAC AATCTAAGCC CGGTGCCGAA GGCTCAAGCA CACTGCAAGC CCTATTGCAG
ACGCCCAATC CCGATATGCT GTTGATTATC GAAGGGCCAA AGCTCGCCAA CGAGCAAACC
AACAGCAAAT GGTTTAAGAC CTTAGATGCC CATGGCATGT ATCTGCCCTG CGCTACGCCA
GAGGGCGATC AGTTTATGCG CTGGCTCGAT GGCCGCATCA AGCACTTTAA GCTCAATCTG
CAGCCGGATG CCCGCGCTAT GTTGCATTCG CTATATGAAG GCAATTTACT GGCTGCCGAT
CAAGCCATGC AGTTGCTGCA ACTCCTGAGT CCAACAAATC CCGTCAGTGC CGATGAACTG
AGCCACTATT TTGAGGATCA GTCACGCTTC ACCGTATTCC AACTCACGGA TGCATTACTG
AATAATAAAC AAGATAGCGC GCAGCACATG CTGGCCCAGC TCAATGGCGA AGGCACAGCC
TTACCTATCC TACTGTGGGC CTTGTTTAAA GAGCTCGGCT TATTATTCAA TTTGAAATGC
GAGCAAGCCC AAGGCGTCGC GCTGAGTGCG CTCTGGAGTA AACATCGAAT TTGGGATAAA
CGTAAGCCTC TTTATCAAGC GGCGCTGCAA CGGCTCAGCC TCGAACAGCT CGAACACATG
CTCGCCCTTG CCTCAAAACT GGAGCTCAAC TTAAAGCAGC AGGGTAAAGA GGATTGGACT
GGGCTCAGCC ACCTGTGTCT GTTATTTGAT CCTCGAGCCC ATCGGCATCT GGCACATATA
GCCATAGACT AA
|
|---|
| Protein sequence | MRVYPDQLSR HLNQLFPCYL IFGDDPWLIE TTKDQIRQFA KRQGFDEKVQ LIQETGFNWN
DLTQEWQAMS LFSSKRLIEL TLPQSKPGAE GSSTLQALLQ TPNPDMLLII EGPKLANEQT
NSKWFKTLDA HGMYLPCATP EGDQFMRWLD GRIKHFKLNL QPDARAMLHS LYEGNLLAAD
QAMQLLQLLS PTNPVSADEL SHYFEDQSRF TVFQLTDALL NNKQDSAQHM LAQLNGEGTA
LPILLWALFK ELGLLFNLKC EQAQGVALSA LWSKHRIWDK RKPLYQAALQ RLSLEQLEHM
LALASKLELN LKQQGKEDWT GLSHLCLLFD PRAHRHLAHI AID
|
|---|
| |