Gene Sbal223_1088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_1088 
Symbol 
ID7087861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1282368 
End bp1283543 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content45% 
IMG OID643459999 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_002357026 
Protein GI217972275 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1686] D-alanyl-D-alanine carboxypeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000911749 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000985574 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGAATT TTGTAAAAAG TCCCATTAAA ACATTGCTGC TAATTTCCAG TGCCTCTCTC 
CCCGTTTATG CTGCGCAGCC TATTATTACA CCTGATGCAC CTTCAGTAGC CGCCAAGGCG
TTCGTATTGA TGGATTATAA TTCGGGTCAG ATTATCGCTG AAAGTAACGC TTATGAAAGC
CTTAACCCAG CCAGTTTAAC TAAGATGATG ACCAGTTACG TGATCGGTCA AGAAATCAAA
GCGGGCAATG TCTCCGTTGA TGATGATGTG ACTATCAGTA AAAATGCTTG GTCTAAAAAC
TTCTCTGACT CTTCTAAGAT GTTCATTGAA GTGGGCACTA CGGTTAAAGT GGGCGATCTA
AACCGCGGTA TCATCATTCA ATCGGGTAAC GATGCGTGTG TGGCGATGGC CGAGCACATT
GCCGGTACTG AAGGCGCCTT CGTTGACATG ATGAACTCAT GGGCGAAGCA ACTGGGAATG
CGTGATAGCT ACTTCGAAAA CGCCCACGGT TTAGATGCAG AAAACCACAA ATCAACCGCC
TATGATATGG CATTACTGGG CGCAGCGTTA ATCCGCGACG TGCCAGATGA ATACCACATC
TATAGCGAAA AATTCTATAC ATTCAATGGT ATCAAACAAT ACAACCGTAA TGGTTTATTG
TGGGATAACA GCATGGACGT GGACGGCATC AAAACCGGTC ACACCTCAGG TGCAGGCTAT
AACTTAGTAG CATCAGCAAC CAAAGATGGC ATGCGTTTAA TTTCAGTGGT GATGGGTACT
CAAAGTGAAT CTGCCCGTAA AGCTGAAAGT AAGAAATTAC TGACCTATGG CTTCCGTTTC
TTCGAAACCG TAACACCATA CAAGGCGGGC GATAGCTTTA TCACTCAGCA AATTTGGTAC
GGCGACAAGA GCACGGTTGA TTTAGGCGTG GCAACTGACA CACCTATCAC CATCAGCCGT
GGCCGTGGTA AAGACTTGAA AGCTAACTTC GAGCTGACTA AGCCATTAGA TGCACCTTTA
AAGAAAGGTG AAACTGTTGG CCGTCTATTC TTCCAACTTG ATGGTAAAGA CATCGCCCAG
TTCCCACTGG TGACGTTGCA AGAAGTCAAC GAAGGCAGCT GGTTTAGTAA ATTAGTAGAT
TACTTTAAGC AGATGTTTTC TGGATGGTTT AGCTAA
 
Protein sequence
MMNFVKSPIK TLLLISSASL PVYAAQPIIT PDAPSVAAKA FVLMDYNSGQ IIAESNAYES 
LNPASLTKMM TSYVIGQEIK AGNVSVDDDV TISKNAWSKN FSDSSKMFIE VGTTVKVGDL
NRGIIIQSGN DACVAMAEHI AGTEGAFVDM MNSWAKQLGM RDSYFENAHG LDAENHKSTA
YDMALLGAAL IRDVPDEYHI YSEKFYTFNG IKQYNRNGLL WDNSMDVDGI KTGHTSGAGY
NLVASATKDG MRLISVVMGT QSESARKAES KKLLTYGFRF FETVTPYKAG DSFITQQIWY
GDKSTVDLGV ATDTPITISR GRGKDLKANF ELTKPLDAPL KKGETVGRLF FQLDGKDIAQ
FPLVTLQEVN EGSWFSKLVD YFKQMFSGWF S