| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1078 |
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| Symbol | |
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| ID | 7087851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1273110 |
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| End bp | 1274114 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643459989 |
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| Product | transcriptional regulator, LacI family |
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| Protein accession | YP_002357016 |
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| Protein GI | 217972265 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.00527595 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGCTACCA TAAAAGATGT CGCGAGAGTG GCGGGTGTCT CAATTGCAAC TGTATCACGG
GTTGTTAACG GTCAGGGCAA GGTTGGCGCC CAGTGCCGCA CACGGGTGCA GAAGGTGATA
GAACAACTTA ACTATCGCCC AAACTCGAAC GCCAAAGCGC TTGTTAAACG CAGTACTAAT
ACGATTGGTA TCGTCACGCC GAATTTATCT ATGTCGTTTT TTAGCAGCTT AGCCTGCGGC
GCGGAACGTG CTGCCCGTGA GCGTGGTTAT GGCTTGATTA TGCGTAACTC GCTTTATGAG
ACTCAGTCTG AAATCGATGC GATTGAATCC CTGCGCGATC AAAACTGTGA CGCTATTATT
CTCCACAGTG AGTATTCGGA TGAGTCGACC TTAATCGGCC TCACTGAGCA AATCCCCGGC
CTTGTGATCA TCAACCGCTT TATACCTAAA ATTGCCGATC GCTGCGTTTG GCTCGACAAC
GTGACCAGTG CCCAAGAGGC GACTAATTAC TTACTCGACC GCGGCCATAA AGATTTCGCT
GTGATCACCA GTATTTACCA AAACCGCGAT CCTGCTTCAC GCATATTGGG GGTACGCCAA
GCTCTGTTGT TGCGGGATAT GAAGTTGCCA TTGGATGCTA TCGAAGAGTC CACCGCCAAT
ATGGAAGGTG GCGAAGCCGC AGTACAAGCC TTACTCGCAA GAGGCACACC ATTCACGGCC
ATCTTAGCTT ATAACGACTT AATGGCGATT GGTGCGATTC ATGCCTTATT CGCGGCGGGA
ATTAGGGTGC CAGAAGATGT CTCTGTGATT GGTTTTGATG ACTTATCCAT TGCCCGTGCT
TGCCGTCCTC GATTGACGAC CATGCATTAC CCGATTGAGG AAATGGCCAA TTACGCTACA
GATTTAGCCA TTAAGTTAGC CTCAAATGCC ACGGCGGAAT CACGCAATAC TCACCTATTT
TTATCCAACT TAGTCGAGCG AGACTCGGTT GCGGCCTTAG TTTAA
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| Protein sequence | MATIKDVARV AGVSIATVSR VVNGQGKVGA QCRTRVQKVI EQLNYRPNSN AKALVKRSTN
TIGIVTPNLS MSFFSSLACG AERAARERGY GLIMRNSLYE TQSEIDAIES LRDQNCDAII
LHSEYSDEST LIGLTEQIPG LVIINRFIPK IADRCVWLDN VTSAQEATNY LLDRGHKDFA
VITSIYQNRD PASRILGVRQ ALLLRDMKLP LDAIEESTAN MEGGEAAVQA LLARGTPFTA
ILAYNDLMAI GAIHALFAAG IRVPEDVSVI GFDDLSIARA CRPRLTTMHY PIEEMANYAT
DLAIKLASNA TAESRNTHLF LSNLVERDSV AALV
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