| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1074 |
|---|
| Symbol | |
|---|
| ID | 7087847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1266472 |
|---|
| End bp | 1268034 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643459985 |
|---|
| Product | SSS sodium solute transporter superfamily |
|---|
| Protein accession | YP_002357012 |
|---|
| Protein GI | 217972261 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4146] Predicted symporter |
|---|
| TIGRFAM ID | [TIGR00813] transporter, SSS family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.729495 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0148232 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCTCG CCACACTCGA TATAGCCATC ATAGCCATTT ACGCCATTGG TCTGTTGTTG
GTCGCGTTAT GGATTTCACG CTCGGAGAAA AATCACGAAC GTAATACGGA AGATTACTTC
CTCGCCAGTA AAGCCTTACC TTGGTGGGCG ATTGGTGCCT CGTTAATTGC TTCAAACATC
TCGGCCGAGC AGATTATCGG CATGTCAGGT TCAGGTTATG CCATAGGTTT GGCCATTGCC
TCCTATGAAT GGATGGCGGC GATTACCTTG CTATTGGTCG GCAAGTATAT GTTGCCTATC
TTTTTGAAAA ACAAGATTTT CACTATGCCG CAGTACTTAG AGCAGTGCTT CGATAGCCGA
GTGAAGACAG TGCTGGCACT ATTCTGGCTT GCCGTGTATG TGTTTGTAAA CTTAACCGCT
GTGCTGTGGC TCGGTGGTTT GGCGATTCAA ACGGTCACGG GAATCGATTG GTTTACGGGC
ATGATGATGC TGGCAATCTT TTCAACGGCA TACTCGCTTT ATGGTGGCTT AAAAGCCGTT
GCCTACACAG ATATCATCCA AGTGGTGTTA TTGGTGTTTG GTGGATTGAT CTTAAGTTAC
TTGGCCTTAG ATGCAGTGTC CGATGGTGCG GGTGTGATAG CCGGTTTTGG TGTGCTGACC
GAGAAGTTAC CTGAACATTT CGACATGATC TTAAGCAGTG ATAATCCAGC TTACATGAGC
TTACCCGGCA TTTCTGTGCT GGTGGGCGGC ATGTGGATCA TGAACTTAAG CTATTGGGGC
TTTAACCAAT ATATTATTCA ACGCGCATTG GCGGCGAAAG ATATCCGCGA AGCCCAAAAA
GGCATGGCGT TTGCGGCTTA TTTAAAACTA CTGGTACCGG TTATTGTGGT GTTGCCTGGT
ATCGCCGCTG TTGTGTTATA TCCTAATCTT TCAGCGCCGG ATCAAGCTTA TCCGTCGATG
ATAGAGCTGA TGCCCGTTGG GATTAAGGGA TTAGTGTTTG CGGCGCTAGT GGCGGCAATT
GTTTCGTCAT TAGCCTCGAT GACCAACAGT ATTTCAACCA TTTTCACTAT GGATATCTAT
CGTCACCTCA AACCAGCTAA ATCACAAACT CACTATGTGT TTGTGGGCCG CGCGGCTACC
TTAGTTAGTC TAGTTATTGC GATGATCATG GCTGAGCCGC TACTGGGTAA ATTTGACCAA
GCCTTCCAAT ATATTCAGGA ATTTACTGGC GTATTTACGC CGGGTATTGT GGTGATTTTC
TTACTGGGCA TGTTCTGGCG TAAAGCTTCA CCCGCGGGCG CCATTGCGGC GGCTCTGGGA
TCTGCCGTGG GTTCATTTGT GCTTAAGTTT ACTTGGCCGA CATTGCCTTT TATGGATCGC
ATGAGCGTGG TGTTCCTTTT GTGTTTAGGA CTCGGTGTGT TGGTGTCTTT ACTGCGCCCA
AGAACGCAGC CAAGCAAGAC GGTGGATTTA AGCCAAGTGT CTTTTGCGAC CACGCCATCC
TTTAATCTGC ATACTGCGAT TATCGCGATT ATCTTAATCG CACTGTACAC AACTTGGTGG
TAA
|
|---|
| Protein sequence | MKLATLDIAI IAIYAIGLLL VALWISRSEK NHERNTEDYF LASKALPWWA IGASLIASNI
SAEQIIGMSG SGYAIGLAIA SYEWMAAITL LLVGKYMLPI FLKNKIFTMP QYLEQCFDSR
VKTVLALFWL AVYVFVNLTA VLWLGGLAIQ TVTGIDWFTG MMMLAIFSTA YSLYGGLKAV
AYTDIIQVVL LVFGGLILSY LALDAVSDGA GVIAGFGVLT EKLPEHFDMI LSSDNPAYMS
LPGISVLVGG MWIMNLSYWG FNQYIIQRAL AAKDIREAQK GMAFAAYLKL LVPVIVVLPG
IAAVVLYPNL SAPDQAYPSM IELMPVGIKG LVFAALVAAI VSSLASMTNS ISTIFTMDIY
RHLKPAKSQT HYVFVGRAAT LVSLVIAMIM AEPLLGKFDQ AFQYIQEFTG VFTPGIVVIF
LLGMFWRKAS PAGAIAAALG SAVGSFVLKF TWPTLPFMDR MSVVFLLCLG LGVLVSLLRP
RTQPSKTVDL SQVSFATTPS FNLHTAIIAI ILIALYTTWW
|
|---|
| |