| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1070 |
|---|
| Symbol | |
|---|
| ID | 7087843 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1258952 |
|---|
| End bp | 1261690 |
|---|
| Gene Length | 2739 bp |
|---|
| Protein Length | 912 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643459981 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_002357008 |
|---|
| Protein GI | 217972257 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | [TIGR01782] TonB-dependent receptor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000299075 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0342154 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA ATAAATTCAA GCTCAGCAAA GTCGCAATTG CATTGCTCCC TTTATGCTAT
GTAACCCATG GCTTTGCTGC GGAAGATGAA ACTAAAAAAG ACACCACGCC AGTTGCGGCT
ACTGCCGAAG AAAAAGTTGA GGTGATAGAA GTTAGGGGAT TTGCCTCAAC CCTAAAACAA
TCGCTGTTTA GCAAGCGTAC TTCATCGCAA ACGGTGGAAA CGATTTCTAC CGATGATCTT
GGCAATATGC CTGATGTGAC CATTACCGAT GCACTTGCTC GTCTGCCTGG GGTGGCAGCC
GATCGCGATC GCGGTAACCC AAGTCGTATT TCAATTCGTG GTATGGGACC ACGTTTGAAT
ATGGCAACGA TGAATGGCCG TGAAATTGTT AGCGGTGAAC CAAGCCGTGA TGTGCGCTAC
GAACAATTTC CCGCAGAACT GATTAATGCG GTACAAGTTT ATAAAAGTCC GACGGTAAGT
AATATCGAAG GCGGTATTTC TGGCTTAGTG AATATGGACT TTGTGAGTCC ATTAGCGCAA
AGCGAACGTA AAGTGACCTT GAGTGCCAAT GGCATGTATT ACGATCTGGC CGATGAATTG
CCGGACGGAC AAACTACAGG CTCTAAATTG AGCTTTAGTA TGGTTGATAA AATCACCGAT
GATTTAGGCT ATGCCTTTGG TATTGCTTAT CAAGATCAGC CTTCTGTGCA ACGTGGAACT
AAGAGCTGGA ATTACAATAA TGGCGCAGAT AGAGGCGACA TTAATGGTAA TGGCATCCAA
GAGTCTGCGC CTTGGGGCGG GCAATCTGGC ACTAAAATCG GTAATAACAA ACGCTTAGGC
ACTATGGGGA TCCTAGAGTG GCAAGCAAGC GATAAGCTAA AACTCAAATA CGATCTGTTT
TACTCTAAGT TTAAAATTGA AGAACATGAA GATCAGATGT ACTTCAATAA TTTAGGTAAC
TATCAAAGCG GCCAAAATTG GAACTACAAT CATTCTGCGG CTCAGCCTGA CATCATTACA
AAAGCCGATG GCAGCGAGCA GTTAGTGGGC GGTGGATTGG CTTATGCCAG TCACGAAGTG
CATAACGCGA CTTGGTTCCA AGAAAACCAA TTGCTGAGCA CAGGTTTGAA TGCCGTATGG
GAAGGGGACG TTTGGCGAAT TAAGGCCGAT GTCGGTTTTT CTAAGGCGCA AATCGATTCT
GTCTGGGTCG ATATCATCTC TAGCTACAAC GGCCCAAGCT ATGACTTAGG TTGGAGTGTG
GCCGATGGTA ATAGTTTTAG CGCAGAAGTA CTTGATAATC CTGCGGAAGG ATTAAGCGCG
ATAGACATAG CTAACCCAGA TTATTACACC TTAGGTGCAA TGAAATGGGT GGAAACCACA
CCAGGTGTTT GGGAAGAGCA AAACATTGGC ATGATCGGGG ATAACGACCG TGATCTGTCG
GATAAAATGG TCAATACCCG TTTAGACTTC GAGCGTTATG TCGATTGGGG AGTTTTCGAT
CAGCTGAGCT TTGGTGTGCG TTACTCGGAT AGAGATAAAC AAAACCGTGT TGTCGATTGG
CAAAAAGCCG TTATCGCGGG CAATGGTTTA AGCAACTATG GCAGCAGTTA TACCCTTGGA
GGCGATTATA AAGTCCCTAA CCTTTATGCT CTGAAGGATT GGGATAATGT GGCGAGTGTT
GCCTTTGGTG GTCGAGGCAC AGCGGATTAC TCACTGCAAA ACAATGCTGA CAAACTTGCT
TCTTGGGGGC TGACTGAAAA GAACAGTGCT GCTTATGCCA TGTTGAACAT CAATAGTGAA
TGGGGTGATA TGCCTTATTC GGGCAATATC GGCATTCGCG TTGTCAACAC GCGTTCAACC
TCAGAAGGCT ATGAGCAGTT GCTCGATGGC TCTCTCGCCC CAGCAAGTGT CGATCATGAA
TACACTGAGG TGCTGCCGTC ACTTAACTTG CTGTTTAATG TGACTGATGA TTCGCAAATC
CGTTTTGGCC TAGCTCGTAC TATGTCACGT CCTCCATTGA TTGAGATGCG CACCGGTTTC
TCCATCGATA CCACAGTGAC GCCCAATACC GCTTCTGGCG GTAATCCTGA GTTAGACCCA
TATATTGCCA ATCAGGTTGA CCTTGGTTAC GAGTATTACT TCTCTGACAG TGGCGCCATG
ATAGTGTCTT TCTTCTACAA AGACATGCAA AGCCATATAG GTATCGCGAC CAGCACTAAA
ACCTTAGAAG GTGTCGATTA TGAATATAGC GGCCCAATTA ATGGTGATGG TGGAGCGATT
AAAGGTTTTG AAGTCTTGTA TCAACAAAGC TTTGATTTCT TACCTGCACC CTTCGATGGT
TTAGGTGTTT ATGCCAACTA CTCCTATACA GATTCTGCCG TGGAAGAATT CACGCCACAG
GATAATCCAT ACACTTTGGC GGGTTTGTCT AAAAATGTGG GCAACGTGAC CTTATGGTAT
TACAAAGAAG GATTTGAAGC TCGAGTGGGC TACGACTACC GCAGTGAATA CACTGGTATC
AATAGCTGGG ATCCGAGTCA AATCTCTTTA TATGATGCTC AAGGTACGGT TGATGCGAGT
ATTTCTTATC AGTTCACCGA TAACTTTAAA GTGATGTTGC AGGGCCAAAA CCTGACCAAC
GAAGCGTCAA CAAGTTACTG GGACAACGAT AAAACCCGTC TAGCAGAAAA TGTGGAATGG
GGTCGCCGTT ACGTGCTGGG CTTTACGCTC GCGATGTAA
|
|---|
| Protein sequence | MKNNKFKLSK VAIALLPLCY VTHGFAAEDE TKKDTTPVAA TAEEKVEVIE VRGFASTLKQ
SLFSKRTSSQ TVETISTDDL GNMPDVTITD ALARLPGVAA DRDRGNPSRI SIRGMGPRLN
MATMNGREIV SGEPSRDVRY EQFPAELINA VQVYKSPTVS NIEGGISGLV NMDFVSPLAQ
SERKVTLSAN GMYYDLADEL PDGQTTGSKL SFSMVDKITD DLGYAFGIAY QDQPSVQRGT
KSWNYNNGAD RGDINGNGIQ ESAPWGGQSG TKIGNNKRLG TMGILEWQAS DKLKLKYDLF
YSKFKIEEHE DQMYFNNLGN YQSGQNWNYN HSAAQPDIIT KADGSEQLVG GGLAYASHEV
HNATWFQENQ LLSTGLNAVW EGDVWRIKAD VGFSKAQIDS VWVDIISSYN GPSYDLGWSV
ADGNSFSAEV LDNPAEGLSA IDIANPDYYT LGAMKWVETT PGVWEEQNIG MIGDNDRDLS
DKMVNTRLDF ERYVDWGVFD QLSFGVRYSD RDKQNRVVDW QKAVIAGNGL SNYGSSYTLG
GDYKVPNLYA LKDWDNVASV AFGGRGTADY SLQNNADKLA SWGLTEKNSA AYAMLNINSE
WGDMPYSGNI GIRVVNTRST SEGYEQLLDG SLAPASVDHE YTEVLPSLNL LFNVTDDSQI
RFGLARTMSR PPLIEMRTGF SIDTTVTPNT ASGGNPELDP YIANQVDLGY EYYFSDSGAM
IVSFFYKDMQ SHIGIATSTK TLEGVDYEYS GPINGDGGAI KGFEVLYQQS FDFLPAPFDG
LGVYANYSYT DSAVEEFTPQ DNPYTLAGLS KNVGNVTLWY YKEGFEARVG YDYRSEYTGI
NSWDPSQISL YDAQGTVDAS ISYQFTDNFK VMLQGQNLTN EASTSYWDND KTRLAENVEW
GRRYVLGFTL AM
|
|---|
| |