| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1053 |
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| Symbol | |
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| ID | 7087826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1241968 |
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| End bp | 1242702 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643459964 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_002356991 |
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| Protein GI | 217972240 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.158533 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000197911 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCTGCTC CTGCCGATAG CCCTGCCAAA GTCGATACTT TTATTGCGCC GCCTTGCCTC
GGGCAAATAC GCGTGCTTTA TCAAGATAGC GACATTCTGC TGATTGATAA GCCGAGCGGA
TTATTGAGTC TGTCGGGGAA GAATCCGCTC AATCTCGATT CAGTGCATTA TCGCTTAGTG
CAGGATTTTC CGACGGCCAC TTTGCTGCAC AGACTTGATT TTGGCACTTC GGGCATCATG
CTGGTGGCGC TGAATAAAAG CGTGAATGGC TTGCTGACTA AGCAGTTTCA GGCACGTACG
ATCGAGAAGC GTTATACAGC CTTGCTGCAC GGACATATTG CCGCTGACAG CGGGGTGATT
AATCTGCCGA TCGCTAAAGA TGTCGATCAT TTCCCACTAC AAAAGATTTG CCACAGTACA
GGTAAACCTG CGATCAGCGA ATATCGGGTG CTCGAGCGGT TAACCGAGCC TTTCGCCACG
CGGGTCGAGT TTACCCCGGT TTCTGGCCGA ACCCATCAAC TGCGGATCCA CAGTCAGCAA
TTTGGTCACT CGATTCTGGG GTGCGATCTC TATGGTGGCG TGGGTGAGAG TGTGGCTGAT
AACGCTGCTG CACCTGATCC AGACATCACT AAGATGACGA GTAACAGCAG ATTAATGCTG
CATGCGACCC GCTTAGCGTT TGATCATCCA TTGACGGGTG AGCGTATCGA CTGGCTTTGC
GAGTGTCCTT TCTAA
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| Protein sequence | MSAPADSPAK VDTFIAPPCL GQIRVLYQDS DILLIDKPSG LLSLSGKNPL NLDSVHYRLV
QDFPTATLLH RLDFGTSGIM LVALNKSVNG LLTKQFQART IEKRYTALLH GHIAADSGVI
NLPIAKDVDH FPLQKICHST GKPAISEYRV LERLTEPFAT RVEFTPVSGR THQLRIHSQQ
FGHSILGCDL YGGVGESVAD NAAAPDPDIT KMTSNSRLML HATRLAFDHP LTGERIDWLC
ECPF
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