Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1048 |
Symbol | |
ID | 7087821 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1234626 |
End bp | 1235435 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 643459959 |
Product | peptidase M48 Ste24p |
Protein accession | YP_002356986 |
Protein GI | 217972235 |
COG category | [R] General function prediction only |
COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000265758 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000297579 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTAA TGCGTTTAGG CTTAGTGGGT TTGGCGGTCG TGCTCGGATT ATCGGCCTGC GCGACCACGC AATCGCCAAC GGGGCGAGGG CAGACTTTGC TCTTTTCAGC GGCGCAGATG CAGCAGATGG GTGATGCTTC TTTTGAAGAG ATGAAAAAGC AGCAAAAGGT GAGTAGCGAT AAAAAGCTGA CGCAATACGT GAATTGTGTC GCCAATCGGG TGACGGCAGT GCTGCCGGAT CAAACTCAGC GCTGGGATGT CGTCTTGTTT GACTCTGAAC AAGTTAACGC CTTTGCACTG CCAGGTGGCC ATATTGGTGT CTATAGCGGT TTACTTAAGG TCGCCAATGG TCCTGATCAG CTTGCCACTG TGCTTGGTCA CGAAGTGGCG CACGTATTGG CGCAACATGG TAACGAGCAG GTTTCTCGCG GACAGTTAAC GGGCGTCGGT ATGCAAATAG CCGATGCGGC GTTGGGGGCG AGTGGCGTGT CGAATCGCGA CTTATATATG TCGGCGTTAG GACTCGGTGC TCAGGTTGGG GTCATTCTGC CCTTTGGCCG CGCTCAAGAG AGCGAAGCCG ATGTGATGGG CTTAGAGCTG ATGGCGAGAG CCGGTTTCGA TCCGGCACAA AGTGTGACCT TATGGCAGAA CATGTCGAAG GTGGGTGGCA GTCAGGGGCC GGAATTATTA TCAACCCATC CATCGAACAG TAATCGCATC GCTCAGTTGC AACAACTGCA AGGGCAGATG CAGCCACTCT ATGCCAGTGC TAAAACTCAA GTGAAGAATC AATGTGTGGC GCCGAAATAA
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Protein sequence | MKLMRLGLVG LAVVLGLSAC ATTQSPTGRG QTLLFSAAQM QQMGDASFEE MKKQQKVSSD KKLTQYVNCV ANRVTAVLPD QTQRWDVVLF DSEQVNAFAL PGGHIGVYSG LLKVANGPDQ LATVLGHEVA HVLAQHGNEQ VSRGQLTGVG MQIADAALGA SGVSNRDLYM SALGLGAQVG VILPFGRAQE SEADVMGLEL MARAGFDPAQ SVTLWQNMSK VGGSQGPELL STHPSNSNRI AQLQQLQGQM QPLYASAKTQ VKNQCVAPK
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