| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1046 |
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| Symbol | |
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| ID | 7087819 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1232424 |
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| End bp | 1233755 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 643459957 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_002356984 |
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| Protein GI | 217972233 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0103787 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0000000602754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCTTTC CCGAGCTTTC TTCTTCCCCT GAGTCGTTAA CTTTTGCTGA GCTTGGCTTA
AATTTGGCGT TACTTAAGGC CTTGCCTGCA ACGTTGGCGC ATCCGACAAA GGTGCAGCAA
TTGGCGATTC CGGCCAGTCT TGCGGGACGG GATTTGTTAG CCTTAGCACA AACCGGTAGC
GGGAAAACCT TAGCTTTTGG TTTGCCACTT CTACAACAAC TTTTGTTGCA ACAGCAAACA
CAGTTGCAGG GTGCCAAGTC TGTGCCGCCC TCAAATGCGC AGGCCTTAGT GCTGGTGCCT
ACGCGGGAAT TAGCGCTGCA AGTGACTGAG GCGCTGCAAA CAGTGGCAAG TCAGTTATCG
GCTTCGTTGA ACATTCAGCT TCTGTGTGGC GGCGTCCCCT TGGAAGACCA ATTAGCCGAA
CTTGCAGCCA AGCCGCAGGT ATTAGTGGCA ACCCCTGGGC GTTTACTGGA TTTATGTAAA
CAGTCCCACA TCAGCCTAGA TTCGATAAAA CATCTTGTGC TGGATGAAGC TGACCGCCTG
CTGGAAATGG GGTTTTGGCC CGATGTGCAA AAGCTGATGG CATTTATGCC TAAGCTTAAG
CAAACCTCGT TGTTTTCTGC CACCTTGCCC GAGGCTTTGG ATACATTGGC GGGCAAGCTG
CTGGTGAATG AGCCGTTACG GGTTGAAGCC CACAAGGTGA ATTCCGTTGC TGGTGAAATC
GAAGAACAAC TTTATTTAGT CAACAAGGGC AGCAAAGCAC AGGCATTGAT TGCGCTGTTA
AAACAATATC AATGGCCACA GGTGCTGGTG TTTATCAGCG CCCGTGATGA TGCTGATGCC
GTCGCTAAAC GGCTCGCCAA AGCGGGGATG AAAGTCGCCG CGCTGCACGG TGAAAAAGAT
CAAGCCGTGC GCAGCCAAAC CTTGGCCGAC TTTAAAGCCA ATCGGATCCA AGTATTAGTG
GCGACAGATT TGATGGCGCG CGGCATTCAT GTTGATGCCT TGCCTGTCGT CATCAATTTG
GATTTGCCCA TGAGTGCGCC TGTGTACGTG CACCGCATTG GCCGCACAGC GCGCGCTGGC
GAAAAAGGGC TGGCGATTTC CCTCGTGTGC CACGGTGAAA TGGCGACCTT AACGGCGATC
CGCAGTTTGA CTGCGCGGGA GTTACCGCTG GCATTATTGG CTGACTTTCC GGTAACGGAT
AAGCCGAGTG AAAATACCAG CGATGGCACC GCAGATAGCA AGGTTGAGCG TAAGCGACCA
CCGCGGGATA AACAGGCGAA TCGCCGTAGC ATCAATAAGC ACAGCGCCAA AGAGTTTAAA
GGTAAGCGCT GA
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| Protein sequence | MTFPELSSSP ESLTFAELGL NLALLKALPA TLAHPTKVQQ LAIPASLAGR DLLALAQTGS
GKTLAFGLPL LQQLLLQQQT QLQGAKSVPP SNAQALVLVP TRELALQVTE ALQTVASQLS
ASLNIQLLCG GVPLEDQLAE LAAKPQVLVA TPGRLLDLCK QSHISLDSIK HLVLDEADRL
LEMGFWPDVQ KLMAFMPKLK QTSLFSATLP EALDTLAGKL LVNEPLRVEA HKVNSVAGEI
EEQLYLVNKG SKAQALIALL KQYQWPQVLV FISARDDADA VAKRLAKAGM KVAALHGEKD
QAVRSQTLAD FKANRIQVLV ATDLMARGIH VDALPVVINL DLPMSAPVYV HRIGRTARAG
EKGLAISLVC HGEMATLTAI RSLTARELPL ALLADFPVTD KPSENTSDGT ADSKVERKRP
PRDKQANRRS INKHSAKEFK GKR
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