| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1031 |
|---|
| Symbol | |
|---|
| ID | 7087804 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1216912 |
|---|
| End bp | 1217349 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643459942 |
|---|
| Product | UspA domain protein |
|---|
| Protein accession | YP_002356969 |
|---|
| Protein GI | 217972218 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.365908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTACTC AAGAAGTGTT ATGCCCTACG GATTTTTCAT CCACCGCAGC CCATGCGCTT
AAATATGCGG TTGAAATGGC TAATCTTTAT CATGTCGATA TTCGATTATT GCATGTGACA
AGCCCAGCCC GTGGCGCCCA TTGCTATGGT ATTGCGGTCG ATATTCCCGC CACATTGGAA
AATGAACTTC AAGCCTTTGT CGATGCAAAA ATGCAAAGTT TGCAGCAGGA AATGCAGCAA
GATCTCAACG AGGGACTCAA TATTAAGCTA GTGGTGCGCC ATGGTGATGC TATCGATGAG
ATTTTAGCGG AAGCCGTCGA TGTCGGCATG GTGGTGATTG CCAGTCATGG CAGCAGTGGT
TTAGCGGATT TTTTAAAGCC CCATGTCACA CAAGATATTG TTAAGTATGC GAAATGCCCT
GTACTAGTGG TGAAGTAA
|
|---|
| Protein sequence | MRTQEVLCPT DFSSTAAHAL KYAVEMANLY HVDIRLLHVT SPARGAHCYG IAVDIPATLE
NELQAFVDAK MQSLQQEMQQ DLNEGLNIKL VVRHGDAIDE ILAEAVDVGM VVIASHGSSG
LADFLKPHVT QDIVKYAKCP VLVVK
|
|---|
| |