| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_1021 |
|---|
| Symbol | |
|---|
| ID | 7087794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1206857 |
|---|
| End bp | 1208056 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643459932 |
|---|
| Product | protein of unknown function DUF214 |
|---|
| Protein accession | YP_002356959 |
|---|
| Protein GI | 217972208 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTGCATA TTAAACCTAT TCTCAGCAGT TTATTGCGCA GTAAAAGTGG CCCAATCTTA
CTGCTTATTC AGATTATCTT GTCTGTGGCG ATTGTGGCGA ATGCGAGCTT TATTATTCAA
GAGCGTTTAG CCCTGATGCA GCGTGATTCG GGGATTAAAG AGTCAGAAGT TTTGACCTTT
AGCTTGTTTA ACTTTGATCC ATTGATTGAT AAAACCGCGC AAAACAAAAT TGATCAGCAA
ATTTTGCGGG GGCTACCCAA TGTGATTGAT GCGACCTCAA CCAATATGTT GCCGTTAAGC
GGTGGCGGCT GGTCGAGCAC TTTAAATCTG GGCCCCGATC CAGATAGCGC TAAATCGACA
CCGCAATTTG CCATGTATCT AGGGACAGAT CATACCATTG AAACCTTAGG CATTAAGCTG
ATTGAGGGGC GTAACTTTTA TCCCCATGAA CTAAAGGACA GCCTCGATAG CCCGAGTCGC
TTAGCGATCA TCTCCAGCGC GTTAGCGAAA GCCGTTTGGC CTGATGAATC CCCACTTGGC
AAAGTGTTGT ACGAGGGCAA GGATGCGCAG ATCACTGTGA TTGGGGTCGT CGAAAAACTG
CAAGGCGCGT GGATTGACAG TTCTAGCCTT GAAAACAGTG TGATTCAAAA TGTGGATTAT
GGCAGCAGTT CTTACATGGT ACGGGCCAAA CCTGAGTTTC ACGCCGAGCT TAAAGACGCG
ATAAAAAAAG CGCTGCTGGC GGAGAATCCT AATCGAGTAC TCGATGGATT TAAGTCAATC
GAGGCCTTAA AAGATAGCTC ATATCGCGAT CATAAATTGA TGATTACTGT GTTAACTATG
ATGGTGGTGT TGCTGCTGCT GATCACTTCG CTCGGTTTAA CGGGCATGGT GATGTTTAAT
ATCCAGCGCC GCACTAAGCA GATAGGTACC CGCCGCGCAT TGGGTGCTAA AAAGCGCGAT
ATTATCAGTT ACTTCCTTGT GGAGAACTAT TTGATTTGCT TAGCGGGAGG CGTGCTGGGC
GGCTTGTTAG CGATACAGTT AGGCCAACAG TTAATGAAAA TCTATAGCTT GCCTATGTTG
GACTTAAGCT ACCCATTATT TACTGTGGCA GGCTTGTTTA TTGTCACCAC GCTGGCGGTT
TACTTACCGG CGCGTAAGGC GGCAAATATT TCGCCAGCAA CGGCAACCCG CAGCGTATAG
|
|---|
| Protein sequence | MLHIKPILSS LLRSKSGPIL LLIQIILSVA IVANASFIIQ ERLALMQRDS GIKESEVLTF
SLFNFDPLID KTAQNKIDQQ ILRGLPNVID ATSTNMLPLS GGGWSSTLNL GPDPDSAKST
PQFAMYLGTD HTIETLGIKL IEGRNFYPHE LKDSLDSPSR LAIISSALAK AVWPDESPLG
KVLYEGKDAQ ITVIGVVEKL QGAWIDSSSL ENSVIQNVDY GSSSYMVRAK PEFHAELKDA
IKKALLAENP NRVLDGFKSI EALKDSSYRD HKLMITVLTM MVVLLLLITS LGLTGMVMFN
IQRRTKQIGT RRALGAKKRD IISYFLVENY LICLAGGVLG GLLAIQLGQQ LMKIYSLPML
DLSYPLFTVA GLFIVTTLAV YLPARKAANI SPATATRSV
|
|---|
| |