Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_1011 |
Symbol | |
ID | 7087784 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1192998 |
End bp | 1194455 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643459922 |
Product | transcriptional regulator, GntR family with aminotransferase domain |
Protein accession | YP_002356949 |
Protein GI | 217972198 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAT CACAATCTAA CTTCCCTCAT TTGCAACTCA AAGATGGCAT CCTCAAAGAC CAACTTTACC ATGCCTTTAG AGAAGCGATT CTCGATGGAC GCTTGCATCC TAGAATGAAG CTGCCCTCTA GCAGAGCCTT ATCGGAAACC ATGCTGATTT CGCGAAACTC AGTACTGCAA GGGTTTGATC GCCTAATTGA TGAAGGCTAC CTGCTGACTA AGCCAGGTTC GGGCACCTAT GTGTCTGATA CGATTCCCGA CGAACTGATC GATATCCCAA ACCGCAGTGA TGTAAGCGTT CAAGCCTTTG ATTCTGCATT GGAACTCAAT CCACAGTTGC TGGAGATGGC GCGACTGAGG GACAAAGGAA ATACCCGCCA CAGCATGTTC AACATTGGCG TGGGATGTGT TGATCTTTTC CCACACCAAC TTTGGGGCCG CCTGTTAGGT AGAGTCTGGC GACAATCGCG TAAAACGCAG GGAAAACATA GCCATAGTGC TGGGCATTTA CCATTGCGCG AAGCGATCAG CGACTATGCC CGTTCAACCC GAGGGCTAAA TTGCACGCCC GAGCAAATCA TCATAGTCAA TGGCACTCAG CAAGCCATTA ATCTCACGGC ACAGGTACTG CTACAACAGG GAGATGAAGT CTGGCTCGAT GAACCCGGAT ACGATGGCGC CTTAGGCGCT TTTCTCTCGC AAAATCTGCA AGTCCGCCCA GTTAGCCTTG ATGATGAAGG CACAAAGATA GCCGAGGCGA TACAGCAATG GCCCTCGGTG AAACTGGCTT TTACCGCACC TTCACATCAG TTCCCCCTCG GCGGAACGCT TAGTCTGCCA CGGCGATTAG CCTTACTCGA TTGGGCCGCT GAGCAGAATA AGTGGATTTT AGAAGATGAC TATAATAGCG AGTTTCGTTA TAGCGCCCGC CCGATACAGG CATTGCAGGG ACTCGATAAA CAACAGCGGG TGATCTACGC AGGCACCTTT TCCAAGATGT TATTACCAGA GCTACGACTC GGCTTTCTCG TCGTTCCGCC TAAACTGGTG GACGCCTTTA ACCTTGCCAA ACATTACGCC GACTCGCATA CGGCTTACTT AGAACAAGCC ACATTAGCGC TGTTTATCGC AGAGGGACAT TACGCGCGGC ATGTGCGGCG AGTTCGAAAA GCTTGTTTAG CGCGCCAAAC GGCGTTAATC ACTGCAATTG AGCAGAATCT GCCAAACAAA TTGTCAGTTC AGATCTCAGA TTCAGGTATT CACCTCGTGT GTTGGCTAAA AGGCGGCTTG ACCGAAGACG AAGTGATCAA CAAATGCCGC CAACTCAGTT TAGGGGCGCA ACCTTTGTCT CGGTATTGCC AAGCGCCCTA TCCAAGGCAA GCGATCTTAC TGGGTTATGC AGCTCATACG CCCGATGAGC TGCGGGAAAA TATTAAAAAT CTCGCCCAAG TCCTTTAA
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Protein sequence | MKKSQSNFPH LQLKDGILKD QLYHAFREAI LDGRLHPRMK LPSSRALSET MLISRNSVLQ GFDRLIDEGY LLTKPGSGTY VSDTIPDELI DIPNRSDVSV QAFDSALELN PQLLEMARLR DKGNTRHSMF NIGVGCVDLF PHQLWGRLLG RVWRQSRKTQ GKHSHSAGHL PLREAISDYA RSTRGLNCTP EQIIIVNGTQ QAINLTAQVL LQQGDEVWLD EPGYDGALGA FLSQNLQVRP VSLDDEGTKI AEAIQQWPSV KLAFTAPSHQ FPLGGTLSLP RRLALLDWAA EQNKWILEDD YNSEFRYSAR PIQALQGLDK QQRVIYAGTF SKMLLPELRL GFLVVPPKLV DAFNLAKHYA DSHTAYLEQA TLALFIAEGH YARHVRRVRK ACLARQTALI TAIEQNLPNK LSVQISDSGI HLVCWLKGGL TEDEVINKCR QLSLGAQPLS RYCQAPYPRQ AILLGYAAHT PDELRENIKN LAQVL
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