| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0978 |
|---|
| Symbol | pbpG |
|---|
| ID | 7086449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 1146903 |
|---|
| End bp | 1147868 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 643459892 |
|---|
| Product | D-alanyl-D-alanine endopeptidase |
|---|
| Protein accession | YP_002356919 |
|---|
| Protein GI | 217972168 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATCC GTTTTCTGCT CAGTAGTTTT ATCCTTGTAT GCAGCAGTCT CACTGTTGCC
GCGACAGCGC ATTCAGCCGA TTCGGCCTCT GTCACTACTA AACATGCCAG CAAAAATGCA
CCCGCTAAAA AAGCACCTGC AAAACAGCAA GAAGTGGCAT CGAGTAGCGC TATGGTGGTC
GACCTTAAAA CCAATGAAGT TTTATATTCG AGTAACCCTA ATGCAGTGGT GCCCATCGCC
TCAGTGACTA AGCTGATGAC GGCCATGGTG ACCTTAGATG CAAAGCTGGC AATGGACGAA
AAGTTAGCGG TTAACATTAA CGACACCAAA GAAATGCGCG GCGTGTATTC TAGAGTGCGT
ATCGGCAGTG AAATTAGCCG TAAAGACATG TTATTGCTGA CTTTGATGTC ATCAGAAAAC
CGAGCGGCAG CGAGTCTTGC CCACCATTAT CCCGGTGGTC ACAAAGCCTT TATTAAGGCG
ATGAATGCAA AGGCTAAAGC ACTGGGCATG AAGAATACCC GTTATGTTGA ACCGACAGGT
TTGTCGTACA AAAACGTCTC CAGCGCCAGC GACCTAATTG TGCTGCTTAA GGCCAGTGAA
GGTTACCCTA TGCTAGGCCA ATTGAGTTCG ACCGAGAAAA AGACGGTCAC CTTTGCTAAA
CCTAGATACA GTTTAGATTT CCGCAACACT AACCGTTTAG TTTATAAAGA TAACTGGAAT
ATCCATCTCA CCAAAACCGG TTTTACTAAC GAAGCGGGGC ATTGCTTAGT GATGCGCACC
GAAATGGCAA AACGCCAAGT GGCCTTTGTG GTGCTCGATG CCTACGGCAA ATATACCCAT
ATAGCCGATG CAAATCGTTT ACGTAACTGG TTAGAGACAG GCAAAGTCAC CCCGATCCCT
GCCGAAGCTA AGCAATATAA GAAACAGCGT AGCCAGCAAC AATTGGCTAA GTTGAGTGAG
ACCTAG
|
|---|
| Protein sequence | MKIRFLLSSF ILVCSSLTVA ATAHSADSAS VTTKHASKNA PAKKAPAKQQ EVASSSAMVV
DLKTNEVLYS SNPNAVVPIA SVTKLMTAMV TLDAKLAMDE KLAVNINDTK EMRGVYSRVR
IGSEISRKDM LLLTLMSSEN RAAASLAHHY PGGHKAFIKA MNAKAKALGM KNTRYVEPTG
LSYKNVSSAS DLIVLLKASE GYPMLGQLSS TEKKTVTFAK PRYSLDFRNT NRLVYKDNWN
IHLTKTGFTN EAGHCLVMRT EMAKRQVAFV VLDAYGKYTH IADANRLRNW LETGKVTPIP
AEAKQYKKQR SQQQLAKLSE T
|
|---|
| |