Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0976 |
Symbol | |
ID | 7086447 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1145118 |
End bp | 1145837 |
Gene Length | 720 bp |
Protein Length | 239 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459890 |
Product | LrgB family protein |
Protein accession | YP_002356917 |
Protein GI | 217972166 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1346] Putative effector of murein hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACT CAAAAGTAGT GGATTTTGTG TTGTCGCAGA CCGGATTAGC CCTATTTAGT TTATTGCTGA CGGTATTTTG TTACTTCGGC GCTAAGCGTC TCTATAAGTA CCACAGAGTC TGGTGGTTAG CGCCCATAGT GTTGGCGCCG ATAGTGATTA CCTTATTGGT GTTTAATCTT AAGATCCCGC TGCCAACCTA TTTTGAATAC ACCCATTGGT TGATGGCCAT GTTGGCGCCC GCGACTATCG CCTTTGCTTT GCCGATTTAT CGTGAGCGTA ACTTGATCCG CCAATATCCG CTGACGATAG GGTTAGGTGT AACGGCCGGA TTATTTCTGG GGATGATTTC TTCTTGGTTG CTGGTGAAGT TTGTGCCTCT GCCGGTGGAA TTGTCTAAGA GTTTGCTGGT GCGTTCGGTG TCGACGCCCT TTGCTATGGA GGCCACCAGT GCCTTTGGCG GCGTACCTGA GTTGACGGCC ATGATGGTGT TAATCACAGG CGTGATTGGT ATGTTGGTGT GCGAGCCACT ATTCAAATTT ATGCGGATTC GTACTTCGTT AGGTAAAGGT GTGGCACTCG GCGCTTCGGC CCACGGTGCT GGCGCGGCAA AAGCCACTGA AATCGGCCAG CAAGAAGGCG TTATCGCCAG TTTAACGATG ATTTTTATTG GTATCGCTAT GGTGTTAGGC GCCCCCGTTT TTGCGTTGAT CTTTATCTAG
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Protein sequence | MTDSKVVDFV LSQTGLALFS LLLTVFCYFG AKRLYKYHRV WWLAPIVLAP IVITLLVFNL KIPLPTYFEY THWLMAMLAP ATIAFALPIY RERNLIRQYP LTIGLGVTAG LFLGMISSWL LVKFVPLPVE LSKSLLVRSV STPFAMEATS AFGGVPELTA MMVLITGVIG MLVCEPLFKF MRIRTSLGKG VALGASAHGA GAAKATEIGQ QEGVIASLTM IFIGIAMVLG APVFALIFI
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