Gene Sbal223_0976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0976 
Symbol 
ID7086447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1145118 
End bp1145837 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content49% 
IMG OID643459890 
ProductLrgB family protein 
Protein accessionYP_002356917 
Protein GI217972166 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1346] Putative effector of murein hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT CAAAAGTAGT GGATTTTGTG TTGTCGCAGA CCGGATTAGC CCTATTTAGT 
TTATTGCTGA CGGTATTTTG TTACTTCGGC GCTAAGCGTC TCTATAAGTA CCACAGAGTC
TGGTGGTTAG CGCCCATAGT GTTGGCGCCG ATAGTGATTA CCTTATTGGT GTTTAATCTT
AAGATCCCGC TGCCAACCTA TTTTGAATAC ACCCATTGGT TGATGGCCAT GTTGGCGCCC
GCGACTATCG CCTTTGCTTT GCCGATTTAT CGTGAGCGTA ACTTGATCCG CCAATATCCG
CTGACGATAG GGTTAGGTGT AACGGCCGGA TTATTTCTGG GGATGATTTC TTCTTGGTTG
CTGGTGAAGT TTGTGCCTCT GCCGGTGGAA TTGTCTAAGA GTTTGCTGGT GCGTTCGGTG
TCGACGCCCT TTGCTATGGA GGCCACCAGT GCCTTTGGCG GCGTACCTGA GTTGACGGCC
ATGATGGTGT TAATCACAGG CGTGATTGGT ATGTTGGTGT GCGAGCCACT ATTCAAATTT
ATGCGGATTC GTACTTCGTT AGGTAAAGGT GTGGCACTCG GCGCTTCGGC CCACGGTGCT
GGCGCGGCAA AAGCCACTGA AATCGGCCAG CAAGAAGGCG TTATCGCCAG TTTAACGATG
ATTTTTATTG GTATCGCTAT GGTGTTAGGC GCCCCCGTTT TTGCGTTGAT CTTTATCTAG
 
Protein sequence
MTDSKVVDFV LSQTGLALFS LLLTVFCYFG AKRLYKYHRV WWLAPIVLAP IVITLLVFNL 
KIPLPTYFEY THWLMAMLAP ATIAFALPIY RERNLIRQYP LTIGLGVTAG LFLGMISSWL
LVKFVPLPVE LSKSLLVRSV STPFAMEATS AFGGVPELTA MMVLITGVIG MLVCEPLFKF
MRIRTSLGKG VALGASAHGA GAAKATEIGQ QEGVIASLTM IFIGIAMVLG APVFALIFI