Gene Sbal223_0972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0972 
Symbol 
ID7086443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1141657 
End bp1142409 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content43% 
IMG OID643459886 
Productextracellular solute-binding protein family 3 
Protein accessionYP_002356913 
Protein GI217972162 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.801508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT CCATGTTATT AGGCGGCCTG ACCTTAACTG CCACCTTGTT GTTAGCTGGA 
TGCGGAAAAA GCGATGACGT GTTAGTCGTT GGCACCAATG CCGCCTTCCC TCCTTTTGAA
TATGTTGGCG GCCAAAGTGG TGATGAAATC AAAGGATTTG ATATCGATCT GGCCAAGCAA
ATCGCTAAAG ATGCCGGTAA GACGCTGAAA GTCGAAAACA TGAAATTCGA TTCACTGATC
GTCGCACTCA ACTCAGGCAA GATTGATTTT ATCGCCTCAG GCATGACGAT TACCGCCGAA
CGTCAGGCAA ACGTAAATTT CTCAGAGCCT TACTACGAAG CGACCCAAGT GGTACTGGTT
AACAAAGATA ACAAAGATAA CAAAGATAAC AATAGTATTA ATACGCTTGA AGATATTAAA
GGCAAACACT TTGCGGTGCA GTTAGGCACA ACCGCTGACA TCATGTCGAA AAAATACACC
CAAAATATCA CCGCCTTTAA TACGGGTTTC GAAGCCATTA TGGAGCTTAA AAATTCAAAG
GTAGATTTAG TGTTATTCGA CAGCGAACCT GCCGCTAACT ATCTGGCTAA AAATCCTGAA
TTAAAGATGA TTAAACTGGA TTTTCCTGCT GAGTTTTATG GCTTCGCCGT GTCAAAAGAG
CAGCCTGAAC TGTTGGCGAG CATCAATAAA ACACTGGCTA ACATGAAAGC CGACGGCCAA
TATCAGACGC TCGTTTCTGC CCATATAAAG TGA
 
Protein sequence
MKKSMLLGGL TLTATLLLAG CGKSDDVLVV GTNAAFPPFE YVGGQSGDEI KGFDIDLAKQ 
IAKDAGKTLK VENMKFDSLI VALNSGKIDF IASGMTITAE RQANVNFSEP YYEATQVVLV
NKDNKDNKDN NSINTLEDIK GKHFAVQLGT TADIMSKKYT QNITAFNTGF EAIMELKNSK
VDLVLFDSEP AANYLAKNPE LKMIKLDFPA EFYGFAVSKE QPELLASINK TLANMKADGQ
YQTLVSAHIK