| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0971 |
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| Symbol | |
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| ID | 7086442 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 1140969 |
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| End bp | 1141649 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643459885 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002356912 |
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| Protein GI | 217972161 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.752056 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATAGACG CAATTAACAG CTCGCTGTTC AGCCCAATTG GCGAAGACGG CATGATAGGT
ATACTGCTGA TATTAAATGG TTTGAAGGTG ACGTTAATCG TCACTTTCTT CGCCATGTTA
TTAGGCGCAG TGTTAGGCAT TGGCACCACT TTTATGAAGA TGTCGTCTAA GTGGTATATC
CGCTTCCCCG CCAATCTTTA TGTCGGTGTT ATCCGTGGCA CGCCAGTGGT TGTACAGTTA
GTGATCCTTT ACTTCATCGT GCTTTCAGCC TTAGATGTCG ATAAAATCAC CGCCGCCATC
ATCGCCTTTG GTCTCAATAG CGGCGCGTAT ATCTCTGAGA TTATCCGCGC AGGCATTCAA
GCCGTCGACA AAGGTCAAAC CGAAGCGGCA CGTTCACTCG GTTTATCCCA AGCGATGACC
ATGAAGTCGA TTATTTTGCC CCAAGCGATC AAGAATATTC TGCCCGCACT CGGAAATGAA
TTTATCGTGC TCCTCAAGGA AACCGCCGTT ATTGGCTTTA TCGGTGGCGT CGACCTTATG
CGCGCCGGTG AAATCATCCG TAGCCGTACC TTCGAGGACA GTGTGCCGTT ATTTACCTGT
GCCCTTATTT ACCTATTCCT GACCTACAGC TTCACGTTTG TGCTGTCGAA ATTTGAAAAG
AGGTTGAAGC AAAGTGATTA A
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| Protein sequence | MIDAINSSLF SPIGEDGMIG ILLILNGLKV TLIVTFFAML LGAVLGIGTT FMKMSSKWYI
RFPANLYVGV IRGTPVVVQL VILYFIVLSA LDVDKITAAI IAFGLNSGAY ISEIIRAGIQ
AVDKGQTEAA RSLGLSQAMT MKSIILPQAI KNILPALGNE FIVLLKETAV IGFIGGVDLM
RAGEIIRSRT FEDSVPLFTC ALIYLFLTYS FTFVLSKFEK RLKQSD
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