Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0970 |
Symbol | |
ID | 7086441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 1140251 |
End bp | 1140976 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 643459884 |
Product | ABC transporter related |
Protein accession | YP_002356911 |
Protein GI | 217972160 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.805871 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATTAAGA TAACCAACCT GCATAAAAAC TTCTTCGATA ATCTCGTGCT CAGGGGCATT AGTGAGCATA TTCGTCAGGG CGAAGTGGTG AGTGTGATCG GCCCAAGCGG CAGCGGTAAG AGTACCTTTT TGCGTTGTAT CAATCTGTTA GAGCAGCCAA GCCAAGGCGA TATCGAGATT GAAGGTCAAC TCATCACAGC ACCAAATGCG AGCGTAGATA AACTGCGGCA AAAAGTGGGT ATGGTGTTTC AAAACTTTAA CCTGTTCCCC CATAAAACCG TCATTCAAAA CATCACCTTA GCACCCATCA GCCTAAAACT GATGACGCCA GCTCAGGCCG AAACGAAAGC CCTCGACCTA CTGGCACAGG TTGGCTTGAG TGACAAAGCC AATGCCTACC CCGCCAGTTT ATCGGGCGGC CAAAAGCAAA GAGTCGCCAT TGCCCGTGCA TTAGCGATGG AACCCGACTT GATGCTGTTC GATGAGCCAA CATCGGCACT CGATCCTGAA ATGGTCGGCG ATGTGCTAGA CGTGATGAAA GACTTAGCGC TAAAGGGCAT GACCATGGTG ATTGTCACCC ACGAAATGGG TTTCGCACGG GATGTATCCG ATCGCGTGAT CTTTATGGAC GGCGGTTATG TAGTTGAATC AAGCCCACCA GATGAGCTAT TCACCAATCC CAAAGAAGCC CGTACCCAAG CGTTTTTAAG CAAAGTATTG CGCTAG
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Protein sequence | MIKITNLHKN FFDNLVLRGI SEHIRQGEVV SVIGPSGSGK STFLRCINLL EQPSQGDIEI EGQLITAPNA SVDKLRQKVG MVFQNFNLFP HKTVIQNITL APISLKLMTP AQAETKALDL LAQVGLSDKA NAYPASLSGG QKQRVAIARA LAMEPDLMLF DEPTSALDPE MVGDVLDVMK DLALKGMTMV IVTHEMGFAR DVSDRVIFMD GGYVVESSPP DELFTNPKEA RTQAFLSKVL R
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