| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0956 |
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| Symbol | |
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| ID | 7086427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1123528 |
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| End bp | 1125252 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 643459870 |
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| Product | TrkA-C domain protein |
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| Protein accession | YP_002356897 |
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| Protein GI | 217972146 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0471] Di- and tricarboxylate transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGTGACT TGTGGCTGTT AGCGATTATT TTGTTAGGTC TTGTGGCTGG CTTAATTAGC
GGCCGTATCA ATCCCGCGGT ATTGTTTTTA TTTGCATTTT TGCTCTGTTA TTTGCTTGGC
ATGGTTGCGC TCGATACCGC ATTAACAAGC TTTACAAATA TTGGCTTAGT CACGCTTGTT
CTGTTGGTAT TGGCCGCGAC GGCGTTAGAA AAAACGTCCC TGCTGGGAAA GTTGAGTCAA
GTCATAGGCA ATAGTTCTTT GCCTATAACA ATGGCAAAGC TTGGGCTATC GACCGCCTTG
CTGTCGTCCT TTACCAATAA CACTGCGGTC GTGGCGTCGC TTATCGGGGT TGTGCGTCGC
AATCAAGCAC ACGCACCCGC TAAGTTATTA TTGCCGTTAA ATTATGCGGC AATTTTAGGT
GGCACACTGA CCCTGATTGG TACCTCGACC AACTTGATTG TGAACTCCTT TGTGGAAAAC
GCCGGCTTAC CCGCCTTAGG TTTCTTCGAG TTCACGCCGG TCGCGGTTGT GATCGTCGTC
GCTGGCATCT TGTTATTGAT CTTACTAGCG AACATTCTGC CCGACAGACG GGAAGAGTCG
GGTGAAGAGG CGCTGCCTTA TTTGCTCGAA GCCCATGTGG CAAAAGGCTC GTCCTTAGTC
GGTCGCAGTG TGGTCGATAA CAAACTCAGG GCGCTGAAGA AGTTATATCT GGTTGAATTA
GAACGCAGCG GCATTTGTAT TTGCCCTGTG CCGCCCCAGT TAGTGTTGCA AGCGGACGAC
GTGCTGCGCT TTAGTGGCGC GGTGGAATCG GTTGAGTTAT TGCACCAATT CGATGGTTTA
GATTGGTTTG GTAAACATCA AGCCAAGGGA CAAAATTTAG TTGAAGCTGT GCTCGCGCCA
TCATCCCGTT TAGTCGGCAG TTCGTTGAAA GCATCGCGTT TTCGTGAGCA ATTTGATGCG
GCTGTGATGG CCATTCGCCG CGGAAATCAT CCGCTGAAGG GCGGACTCGG TGACATTATT
CTGCAACCCG GCGATGTGTT GTTATTGACG CCCGGCGATG GTTTTAGCAA TAGCGCAAAA
TTAAGTTCAG AATTTGCGGC GATTAGCGGC TTAGATTTGA ATGTGCGCTT AGACAGTCGC
CGTGGTCGTT GGGTATTGCT CGGCTTTGCG GTCACGATCA TCCTGAGTGT CACTGGCATA
TTACCCTTGG CTAAAGGTTT AGTGATATTG CTGCTCAGTT ATTTTGCCAT AGGCGCAGTC
ACGCTGGCTG AGCTTAAACG CCGTTTCCCA TTGGAATTAG TGGTGATCGT GGGGAGTGCG
TTAGGGCTCG CTAACTTGAT GATGAGCACT GGCCTTGCGG ACAGTTTAGC CCAAGGATTG
CTCTCGGTTA TCAATGGTTA TGGGGTGTTT GGCGCCTTTA TTGGTGTGTA TTTAATGACT
TTATTGTTGA CTGAACTGGT CACCAATAAT GCCGCCGCGG CGCTAGCTTT CCCTATCGCT
TACGCGATTG CGCTTAATTA CGGTGTCGAT GCCAGACCCT TTATTATGGC CGTGGTCTTT
GGTGCCAGCG CGAGTTTTAT TTCGCCCTAC GGCTATCAAA CTAATTTGAT GGTATTTAAT
GCGGGTAATT ATCGCTTCAG TGACTTCGTC CGCCTAGGAT TGCCGTTATC TGTGCTGTAT
TCCCTGATAG TGATATTTAT GGTGCCGATC ATCTTTCCAT TTTAG
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| Protein sequence | MSDLWLLAII LLGLVAGLIS GRINPAVLFL FAFLLCYLLG MVALDTALTS FTNIGLVTLV
LLVLAATALE KTSLLGKLSQ VIGNSSLPIT MAKLGLSTAL LSSFTNNTAV VASLIGVVRR
NQAHAPAKLL LPLNYAAILG GTLTLIGTST NLIVNSFVEN AGLPALGFFE FTPVAVVIVV
AGILLLILLA NILPDRREES GEEALPYLLE AHVAKGSSLV GRSVVDNKLR ALKKLYLVEL
ERSGICICPV PPQLVLQADD VLRFSGAVES VELLHQFDGL DWFGKHQAKG QNLVEAVLAP
SSRLVGSSLK ASRFREQFDA AVMAIRRGNH PLKGGLGDII LQPGDVLLLT PGDGFSNSAK
LSSEFAAISG LDLNVRLDSR RGRWVLLGFA VTIILSVTGI LPLAKGLVIL LLSYFAIGAV
TLAELKRRFP LELVVIVGSA LGLANLMMST GLADSLAQGL LSVINGYGVF GAFIGVYLMT
LLLTELVTNN AAAALAFPIA YAIALNYGVD ARPFIMAVVF GASASFISPY GYQTNLMVFN
AGNYRFSDFV RLGLPLSVLY SLIVIFMVPI IFPF
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