Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0949 |
Symbol | |
ID | 7086420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1114257 |
End bp | 1114970 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 643459863 |
Product | Prolyl 4-hydroxylase alpha subunit |
Protein accession | YP_002356890 |
Protein GI | 217972139 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3751] Predicted proline hydroxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTTGAGT TTAATTTTGA GCGGGATATG GCTTTATTAC GTGAAGAATA TGCCAGAGAC GCAAAAATCA ACATTCAACA AGTTTGGAAG AATGATACTG CTGCAATAAT TGCCAAAACA CTCGCGAGTG AAGTGATGTT TGATAACGCA ATGTTTGTTG AAAATAAGCC GATGAGAGTT TCAGATCAAC AAATACGCCA ATTGCCTGTC TCCACCCAAA AGGATTTACA GCAAAAAATA TTACAAAATG CTTCAAATGG TATTGGGTTT CTATATGGTA GTCATCTAGT CGGTGGCCTT GACGGAAAAG CATCGCCTGA GTTACTTACT TCGTTACATC GTTTTATTAA CCGCCCTGAA ATGTTTAACT TTATCCAAGC GATTACTGGT ATTGAAGGTA TTTGCTATGC CTCACTACAG GCCAGTCGCT ATATACAGGG AAATTTCTTA ACGAGACATA ATGATGTAGT GGAAAGCGAA GGACGTAAAG TCGCTTTTGT TTTTGGTTTT ACACCAGAGT GGCATCCTGA TTGGGGAGGT TTACTGCAAT TTTTTACACC TCAAGGAGTT CTTACTGACA CTTGGGTTCC CACTTTTAAT AATTTGGCAT TATTTGACGT GCACCATCCA CATTCAGTTT CTTATGTTGC GCCTTTTGCG AGGCATTCAA GATTTTCAGT CACGGGATGG TTTCGTACTA TAGGGCCTCA ATAA
|
Protein sequence | MFEFNFERDM ALLREEYARD AKINIQQVWK NDTAAIIAKT LASEVMFDNA MFVENKPMRV SDQQIRQLPV STQKDLQQKI LQNASNGIGF LYGSHLVGGL DGKASPELLT SLHRFINRPE MFNFIQAITG IEGICYASLQ ASRYIQGNFL TRHNDVVESE GRKVAFVFGF TPEWHPDWGG LLQFFTPQGV LTDTWVPTFN NLALFDVHHP HSVSYVAPFA RHSRFSVTGW FRTIGPQ
|
| |