Gene Sbal223_0892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0892 
Symbol 
ID7087253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp1041634 
End bp1042491 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content49% 
IMG OID643459806 
ProductPirin domain protein 
Protein accessionYP_002356833 
Protein GI217972082 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAT TAAGTCAGTT TTCCGCCAAA GCCGCGATGG ATGGCGATGG GGTCAATATT 
CGCCGTGTCG CCGATTTTGT GACGACTAAA TTTGATCCTT TCTTGATGAT CGACGAAATA
AAATCCGATG ATGAACAAGA CTTTATCGGT GGCTTCCCCG CACATCCCCA TCGCGGAATG
GAGACCTTTA CTTATATTCG TAAGGGCGGT TTTGAGCACC GTGACCAAAT GGGCAATGTG
AAGGCGATTC GTGCCGGCGA TGTGCAGTGG ATGAGTACCG GGTTCGGGGT AGTGCATTCT
GAAATGCCAC TTGCCGATGC TGTCGATGGT CTGCATGGAT TCCAAATTTG GGTCAACATG
CCCGCCAAAG ACAAGCTGCG TCCAGCTAAG TATCAAGATA CTGCGGGTAG CGCTAGCGTT
GAAGCGACCA ATAACACTGG TGCTAGCTTA AAAGCCTTAG CAGGTGATTG GGGCTTTAAA
GATCAACCAC TGATTAGTGC GGCTATACAA GGATTAGCGG GTGAGGCTGC CATTGCTGAT
TTGAGCCTAG CGCCAAACAC TGAGGCCACG CTTGATTTGT CTCAACATGA GTTTGTCGCC
TTGTACTTGT ACCAAGGTGA CTTAAGTAAA GGTGAAGATT CACTGCGGTC ATATCATGAG
GGCGAGTTTT TAGTGCTTGA TAGCCAAAGT GTGCTTAAGC TTAAAGCCGA TGAGCGCGGC
GCTGGGATGT TACTGTTTGC GGGTAAACCT ATCCGTGAAA AAATCGTCCA GATGGGTCCA
TTTGTAATGA ACACCCAAGC GGAAATTCAG CAGGCGATTC GCGATTATCA AGAAGGGCGT
TTCGGCCACA TCGCGTAA
 
Protein sequence
MKVLSQFSAK AAMDGDGVNI RRVADFVTTK FDPFLMIDEI KSDDEQDFIG GFPAHPHRGM 
ETFTYIRKGG FEHRDQMGNV KAIRAGDVQW MSTGFGVVHS EMPLADAVDG LHGFQIWVNM
PAKDKLRPAK YQDTAGSASV EATNNTGASL KALAGDWGFK DQPLISAAIQ GLAGEAAIAD
LSLAPNTEAT LDLSQHEFVA LYLYQGDLSK GEDSLRSYHE GEFLVLDSQS VLKLKADERG
AGMLLFAGKP IREKIVQMGP FVMNTQAEIQ QAIRDYQEGR FGHIA