| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0886 |
|---|
| Symbol | |
|---|
| ID | 7087247 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 1036076 |
|---|
| End bp | 1037989 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 643459800 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_002356827 |
|---|
| Protein GI | 217972076 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCA TCAACCAAGC GCAATTAATC CGTGGCAGCA AAACCCTGCT AGATGAGACC
TCTCTCACGA TTTATCCCGG CCATAAGGTC GGTTTAGTCG GTGCCAACGG CACAGGCAAA
TCTTCACTGC TCGCATTAAT TTTAGGTCAC TTAAGCCTAG ATAAAGGTGA ATTTAGTCTG
CCTTCTGGCT GGCAAATTGC CACTGTGGCC CAAGAAACCC CTGCGCTCGA CGTCTCGGCA
CTGGAATATG TGATCGATGG CGATAGCGAA TATCGTCAAT TAGAAGCCCT ATTACACAAG
GCCCAAGAAG ATAACGACGG CAATGCCATC GCACTCTTAC ACGGCAAAAT CGACGCTATC
GGTGGTTATG CGATTCATTC GCGCGCGGGT TCATTGTTAG CGGGTCTGGG CTTTAGTGAA
GCCGATCAAA GCAATCCAGT GAAAAGCTTT TCGGGCGGCT GGCGTATGCG CCTCAACTTA
GCCCAAGCGT TACTGTGCCG CTCTGACTTA TTGCTCCTCG ACGAACCCAC CAACCACTTA
GACTTAGATA CCATGTACTG GCTCGAAGGT TGGATTAAGT CCTATCAAGG CACGCTGATT
TTAATCAGCC ATGATAGGGA CTTTATCGAT GAAATCGTTG ATGAAATCGT CCACGTTGAA
AATCAAAAAC TCAATTTCTA CAAAGGCAAT TACAGTGCCT TTGAGCGCAT TCGTGCCGAA
CGTATGTCGC AGCAACAGGT TGCCTTCGAA CGCCAACAAA AAGAACGTGC ACACATGCAG
TCCTTCGTTG ATCGTTTCCG TTACAAGGCA AGTAAAGCCA AACAAGCGCA GAGCCGCTTA
AAAGCGCTAG AGCGCATGAC TGAGTTGTTG CCGTCTCAAG CCGACAGCCC ATTTTATATG
GAGTTTCGTG CTCCAGAAGC CCTGCCCAAT CCACTGATTA AAATGGAGCA AGTCGCGATC
GGTTATAGCG ATAAGCCAAT CCTGAGCAAG GTGCATTTAA ACTTAGTGCC GGGTGCGCAT
ATTGGTTTGC TCGGCCGTAA CGGCGCAGGT AAATCGACAT TAATCAAGCT GTTATCGGGT
CAGTTATCGC CAATGACAGG TTTGTATGAA CCTAATCCTG GCGTCAATAT CGGTTACTTT
GCCCAGCATC AAATCGAATT TTTGCGCCTC GACGATACGC CGATGCAGCA TTTAGTGCGT
CTGGCGCCCA ATGCCAGAGA ACAAGAGTTG CGCAACTTCT TAGGCGGTTT TGGTTTTAAC
GGCGATATGG CGCTCTCACC TGTACGCCCC TTTTCTGGCG GCGAGAAAGC CCGTTTAGTG
TTAGCACTAT TAGTTTGGCA ACGCCCTAAC CTATTGCTGC TCGATGAACC CACCAACCAT
TTAGACTTAG AGATGCGCCA CGCCCTAACA ATGGCACTGC AAACCTTTGA AGGTGCTATG
GTTGTCGTCT CGCACGATAG GCATTTACTG CGATTAACCT GTAGCGATTA CTATCTGGTC
GATCAAGGTG AAGTGCGCGC CTTCGACGGT GACTTAGACG ATTATCACCA ATGGTTGCTC
GATGCGGCGA AAGCCAACTC GAATCAAAAC AGCACCAGTG ACGAGATCAA ACCTGCCGCT
GATAAAAAGC AGCAAAAACG CCTCGAGGCC GAAATCCGCC AAAAGGTATC GCCGCTCAAG
CGCAAACAAA CTAAGTTAGA AACCGAGCAG CAGAAGCTAA GCGAACGCCT CGCCGAGCTA
GAACACTTGC TGGCCGATAG CGAATTGTAT GATCAAGATA ACAAAGCCAA GCTAACCTCA
GTACTAACCG AACGAACGAG CTTGACGCAA ACCTTAGAAG ACAGTGAAAT GCAATGGCTC
GAGTTGCAAG AAGAGATAGA TGCAATGGAA CTTGAGGTCA TGGAGCAACA ATAA
|
|---|
| Protein sequence | MISINQAQLI RGSKTLLDET SLTIYPGHKV GLVGANGTGK SSLLALILGH LSLDKGEFSL
PSGWQIATVA QETPALDVSA LEYVIDGDSE YRQLEALLHK AQEDNDGNAI ALLHGKIDAI
GGYAIHSRAG SLLAGLGFSE ADQSNPVKSF SGGWRMRLNL AQALLCRSDL LLLDEPTNHL
DLDTMYWLEG WIKSYQGTLI LISHDRDFID EIVDEIVHVE NQKLNFYKGN YSAFERIRAE
RMSQQQVAFE RQQKERAHMQ SFVDRFRYKA SKAKQAQSRL KALERMTELL PSQADSPFYM
EFRAPEALPN PLIKMEQVAI GYSDKPILSK VHLNLVPGAH IGLLGRNGAG KSTLIKLLSG
QLSPMTGLYE PNPGVNIGYF AQHQIEFLRL DDTPMQHLVR LAPNAREQEL RNFLGGFGFN
GDMALSPVRP FSGGEKARLV LALLVWQRPN LLLLDEPTNH LDLEMRHALT MALQTFEGAM
VVVSHDRHLL RLTCSDYYLV DQGEVRAFDG DLDDYHQWLL DAAKANSNQN STSDEIKPAA
DKKQQKRLEA EIRQKVSPLK RKQTKLETEQ QKLSERLAEL EHLLADSELY DQDNKAKLTS
VLTERTSLTQ TLEDSEMQWL ELQEEIDAME LEVMEQQ
|
|---|
| |