| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0880 |
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| Symbol | |
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| ID | 7087241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 1031209 |
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| End bp | 1032804 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643459794 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_002356821 |
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| Protein GI | 217972070 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCAGTCA TAGATCCTAT AGTGAATGGT TTAAACTCAG GTTGGTTACA TACCGATGCG
AGCCAATTGC AAGAAAACCA ACAGTTTGAA GCCGATGTGA TTATTGTCGG CACAGGTGCT
GGCGGCGGTG TGGCGGCCGA AATCCTCACC CAAGCTGGGC TAAGCGTGAT CATGATTGAG
GCGGGGCCGC TAAAATCCTC CAGCGATTTT AATATGGAAG AGCGGGTCGC TTATCCCAAC
TTGTATCAAC AAGCCGCGGC GATGAAAACC GCTGACAAGG CGATTGGGAT TTTTCAAGGC
CGCGCAGTCG GTGGCTCAAC CACAGTTAAT TGGACCACTT CTATTCGCAC GCCGACCGAG
GCGTTAGCTT TTTGGGCGCA ACATAAGTCG GTTGCAGGGC TTAATCGCGA GAGCTTAGAC
CCTTGGTTTG AGCAAATGGA GCAGCGGCTC AATATCCATG AATGGAACTA TGAGCCTAAC
CGTAATAATG CCGCCCTGAA GCAAGGTTGT ATCAATCTTG GCTGGGAATA CACAGTTATT
AAACGCAATG TGGCGGGTTG TTGGAATACC GGCTATTGCG GCATGGGTTG TCCGGTAAAT
GCGAAGCAAT CTATGTTAGT CACCACTATT CCCTCGGCAC TTGAGAAAGG CGCGCAACTG
ATCAGCCGCG CTAAAGTGAC TAAGATTGAG CACCATAATG GTCAAGTGTT TGCGTTAAAA
GCGCAGGCGC TGGATGTGAA TTTACGACCC ACTGACGTTG AGCTGTTATT TAAAGCTAAA
CATTATATTT TGAGTGCGGG CGCTATCCAT ACGCCGACGA TTTTGATGCG TTCGCAGGTG
CCCGATCCCC ACAAACTTTT GGGTAAACGC ACTTTTTTAC ATCCGACTTT GTTATCCGGC
GGCGTGTTTG CCGATTCGAT CAATGGCCAT AGTGGCGCGC CGCAATCTAT CTATTCCGAT
GAGTTTGTGT GGAAGAATGA CGCCGATGGT GAGCTCGGCT ATAAACTCGA AGTGCCGCCG
GTGCACCCGA TTTTAATTGC CTCTAAAACC TTAGGTTATG GCGCGAGTCA TGCCGAGTTA
ATGGCGCAGT TCAATCAGTT GCAAGTGACG ATTGCCTTAA TCCGTGATGG TTATCATCCC
GACAGTCAGG GCGGTGAAGT GCACTTAACG CCTAAGGGAT TTACCCTAGA TTATCCGTTG
ACCGATGCCT TTTGGCGGGC CGCAAGACGC GCTTTTGCCA GTATGGCTGA GTTACAATTC
TCGGCGGGCG CCTTAAAAGT GTTGCCGATC AGCGATGGTA TGCCTTACTT ATCTTCGTGG
AAAGACGCTA AAGAGAGAAT TGCGCAGATG TCACTCGCGC CACTGCGTAC TATCGTCGCA
TCTGCCCATG TGATGGGCGG TTGTCCCTTC GGCGAAGATG AAAAGCTTTC TATGGTCAAC
AGTTATGGTC AGTCGCACTA TTTAGAAAAT CTGTCTGTAA TGGATGGGTC TATCTTCCCC
ACCAGCCTTG GCGCTAACCC GCAGCTGTCG ATTTATGGCA TCACAGCACG TAATGCCACT
GCACTCGCGC AAAAGCTCAC CGACGGTAAA GGGTGA
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| Protein sequence | MAVIDPIVNG LNSGWLHTDA SQLQENQQFE ADVIIVGTGA GGGVAAEILT QAGLSVIMIE
AGPLKSSSDF NMEERVAYPN LYQQAAAMKT ADKAIGIFQG RAVGGSTTVN WTTSIRTPTE
ALAFWAQHKS VAGLNRESLD PWFEQMEQRL NIHEWNYEPN RNNAALKQGC INLGWEYTVI
KRNVAGCWNT GYCGMGCPVN AKQSMLVTTI PSALEKGAQL ISRAKVTKIE HHNGQVFALK
AQALDVNLRP TDVELLFKAK HYILSAGAIH TPTILMRSQV PDPHKLLGKR TFLHPTLLSG
GVFADSINGH SGAPQSIYSD EFVWKNDADG ELGYKLEVPP VHPILIASKT LGYGASHAEL
MAQFNQLQVT IALIRDGYHP DSQGGEVHLT PKGFTLDYPL TDAFWRAARR AFASMAELQF
SAGALKVLPI SDGMPYLSSW KDAKERIAQM SLAPLRTIVA SAHVMGGCPF GEDEKLSMVN
SYGQSHYLEN LSVMDGSIFP TSLGANPQLS IYGITARNAT ALAQKLTDGK G
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