Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0858 |
Symbol | |
ID | 7088094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | + |
Start bp | 1004814 |
End bp | 1010192 |
Gene Length | 5379 bp |
Protein Length | 1792 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643459772 |
Product | multi-sensor hybrid histidine kinase |
Protein accession | YP_002356799 |
Protein GI | 217972048 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGACAAAA GTAAACTTCG TACTTTTCGC AGCAGAATCT TATCCCACAT AGCCTTGCCT CTCATTTTAA TCATGGCGAG CGTTTATGCT GTCAATGCTT GGTTTAGTTA TCTCTCCTCG GAGAAACGGC TCTACCATAG CCTTACGCAG GAGGCGAGTC ACTCGGCTTC GCGTCTGCAA TTGTTACTCG AGCACGCACA AGCCAATACC CAAGGCCTTG CTGATTTTAT TGGTTTTTTG TCAAGCAAAG AAGATATGAA TGACGCTGAG AGCGTTAAAA GTGTCTTGAT GAATCGACTC AAACGTAATC CTGATTTCTT TGGCTCCGCA GTCGCGTTTA AACCCAACAC CTTTCCCAAT CGCAAACTCT TTTCTCCCTA TGTTTACCGC GACACCAGTG GTAGCGACGA TCTCCATTAT CTCGATATTG GCGCCGAGGG TTACGATTAT ACCGATGGCA CTTGGGACTG GTGGAACAAT GCCATCAATC AAGCGGCGGG CTACTGGTCA AAGGCGTACT TTGATGAGGG GGCGGGCAAT ATTCTGATGG TGACTTATTC GGCTCCTTTT GGTGAGGCGG AGCATTATTT TGGTGTCGCG ACGGTTGACT TAGCGCTAGA TGGCTTGCCA AAGCAATTAG GAATTGCGCC TAATCGGCTG GTGGTTTTAG ACGATCAAGG GCGACTGATT TATCATGTCG ATAGGGAAAA AGTGTTGGCC ACGACTTCAA CACAGTGGCT CGATAAAAAT AAATACAGGA ATGCTGACTT TTGGACCTTA CAAGCGAAAG GACTTGATGG TCAGGCAAGG TTTGTTGACG ATAAGGATGT GGTTTACCTC GCGAGTATTG CAACCGTTCC GCAGCTAAAA TGGCGCGTCA TAGTGCTAGC GCCAGAGCAA GAATTATTCA GCTCACTCCT CGATGATGTG GCATCCATAA TACTCAATTT GAGTTTGCTA ACCCTCTTAT TATTGTTGAC TTGCTATCTG GCCGCTAAGC GACTGACTCG CCCCTTAGAG CTACTCGAGT CGGGTATCTT GTCCTTTGGG CAGGGTAAAA CCCAGCAGCT CATTGTGCCT AAAGGCGCCG TGAGTGAGAT TGTGACGCTG AGCAATACCT TCAATCAAAT GGCGGAATTA CTCGCCGACC GTGAGCAAGC CATTCTTGAT TCCCGTGGCA ACCGCTTTGC TCGTTTGATT GATGGTATGA GTGATAAGTC TTTCTATTGT TCCCTCGATC CTGATGGCCA ACTAGCGCAA GTGAGCGAGG GTGTGACTAA GGTGCTGGGG ATTTCCCCTG ATCTGCTCAA GCGCAAATAC CAAAGACTGT TTTCGGCCAA TCCCCTCAAT GAGAAAAACT GGCAATACAC TGATTTAGCT TTAAAAGGCC AAAATGTTCC TTCGCATCAA GTGGAAATGC TGGATGATCA AGGGCATTTA AGAAGGCTCG ATGTGTTTAT GCAACCATTA ATGTCTGACA CCAATGAGTT AATGTCGGTG GAGATGTTAT TTACCGATGT CACAGAGCAG TTCTCGGCGG CGGTCTGGTC AAATGCGGTA CTGGAAGCCG CGCCCGAGGC CATGTTGATT GTCGATGAAC TAGGGCAAAT CGTGTTCACT AACAGTCGTT GTCTGCAGCT CTTTGGATAC GAAACTGGCG CTATGCTGGG GTTGCAGGTT GAGGCGTTAT TGCCGCAAGA ATTGGGAGAA AGGCATGTAC TTGAACGGCA AACATTCCTG CGTGAAGGCC GTGATAGAAG TATGGCAAAT GCCCGTCATG TGCGGGCGTT AAAAGCCGAT GGTAATGAAT TTATTGCGGA AATAGCGCTG AGTATTCTTC CCACCGCCTT TGATGGACAA AGGCAAGTGG CGGCTTCAAT ACGCGATATG ACACAAAAAC TGGCCGTTGA GCAGAAGATC CGTGATAGCG AACAGCGTTT TCGTGGGCTA GTGACTAATA TTCCCGGCGC CGTTTATCGG ACTCGCATCG GGGATGTATG GTTCATGGAA TATATCAGTG ACAATATTGC CGAGATTACG GGTTACGCAG CGAGTCAGTT TATTGAAAAT CGCCAACGTA CCTTTGCTTC GCTGATTTTA GAGGAGGATA GGCCTACATG CCATTTGCAT ATTGATAGGG CACTCGCGCA GCAAGAAACA TTTGAAGTGG AATATCGTAT TCGCCACCGC GATGGCAGTA TTCGCTGGGT ACATGAGAAA GGTAAGGCGA GTTACACCGA AGAGGGCATT CCACTCTGGT TTGACGGCAG TATCGACGAT ATTACCGAGA GTAAACTCGC GCTGGTACAG TTAGAGCAAT CGCGTCAACA GATGACCAAT ATTACTGAGT CTATTCCTTG CACTGTGTAT CAATTGCAGT GGCACTCGCC CACAGACCGT AGATTTACCT TCCTCTCTGG TGCGGCAATG AAGATGCTTG GGCTGCATCG CGATGATCTT ATGAGTAATT TTGACATCAT AGCCGAGCGG ATTTTTGACG AAGAAAGGCC CGATGTTGTG CGGGCCTTGT CGGGTAAGAG TGAAGACAGA CTGCAATGGA TACGCGAGTT TCGTTATCGC CACCCTAATG GCAGCATATG TTGGATGGAA GCGGGCGCGA GCGGTCATTT GGGTGAAGAG GGTGCCCTCA CGTGGAATGG CTATGTGATG GACATTACCC AACGCAAAAC CATAGAGCAG GAGTTAGCCC TCAGTGAGGC GCACTTTAAG GCGCTGTTCG ATGGGGCGAC CATTGGCATA GTCAATGTGG ATATTAAAGG CGTTATTTTA GATTGTAATG ACCAATTCTG TGCCGATATG GCGCTGTCAC GTAACCATTT ACGTAATACT GCTATTTTTG AGGTTCTCAG TGAGCAAGAT CAACCCATAG CCAAGGCGCA ATTTCAGGAG TTGGTTGAAG GTAAGATTGA CCATTATCGC GGCGAGCGCA GTTTTATTCG TCCTTCCGGT GCGCCTTTGT GGATGACAGT CAACGTGTCG GCACTGCTTG ATGCCCAAGG ACAATTTGAA TCGGCCGTGA TCAGCATGGT CGATATGACA GAGCTTAAAT TGCTCTCAGA TGAACTGTTA CTCGCCAAAG AGCAAGCCGA TGCGGCCAGT AAAGCCAAAG GTGACTTCTT GGCGAATATG TCCCACGAAA TCCGTACTCC AATGAATGCC ATTATTGGCA TGTCCCAGCT GTGCTTGCAG ACCGAATTAG ATAAAAAACA GAAGAATTAT GTAGAGAAGA TTGAGCGGGC ATCGCAGTCT TTGCTGTCGA TTATCAACGA CATTCTGGAT TTCTCTAAGA TTGAAGCGGG TAAGTTAGAT ATAGATTCAG TACCTTTTCA GCTCGATACT ATGCTGGAAG ACCTCAGCGA TATGTTCTCT GAGAAAGCTG CCCACAAACA GATTGAATTA TTGTTCGCCG TTGCGCCCAA CGTGCCTCGT TATCTGTTAG GGGATTCGCT GCGATTAGGC CAAGTGTTGA TTAACTTGAT GAATAACGCC ATTAAGTTCA CCGAACGCGG TGAGGTTTTG CTGTCGCTAA GCTTAGTTGA GCAGCAAGAT GATGATGTCG TGCTGCGTTT TAGCGTGCGT GACAGCGGCA TAGGGTTAAC TGAGCAGCAG CAAGCAAAAT TGTTTAAATC TTTTACCCAA GCGGATACTT CAACCACCCG TAAATACGGT GGCACAGGTT TAGGTTTGGC TATTTGTAAG CAGCTAGTCG AACTCATGGG CGGGAAGATA GGGGTAGAAA GTCAGTTAGG CCATGGCAGC ACTTTCTATT TCACGGTCAA GTTGCACATT TCCGATGGTC AGAAATTAGT ACTCGAGCAA GAGCTTGAAG GCATGTCTGT GCTGGTGGTC GATGATAACG CGACCGCCAG AGATATTATG CGTACTACGC TCGAAAGTAT GGGCTTTAGG GTCGATACGG TTCGCTCGGG TGAAGAAGCA ATAAGCCGCT GCTTATTGCA AGCCTATGAA GTGGCCTTAA TCGATTGGAA AATGCCTAAC ATGGATGGGC TGGAAACCGC GCGTCAAATC CAATTGCAGG CTCAGTCGCA ATCTCAATCA CAATCACAAC CTCAGTCTCA TCCTCAGCCT CAGCCTCAGC CTCAGCCCAA GATTTTGATG GTCTCTGCCC ATGCGGATCA TGAGTTCCTC ACTCAAATTG AGCAACTGGC TTTAGCGGGA TACATCAGTA AACCCATCAG TGCCTCACGC TTACTCGATG GCATAATGAA CGCGATTGGC CGCGAAGGCA TATTGCCCGT GAGACGCCGC ACCGAAGAGT TGGCTCCGCA GTTGTTAGTG CCACTGCAAG GAAAACGTAT CCTATTAGTG GAAGATAACG AGATGAATCT CGAAGTCGCC AGCGAGTTTT TAGAGCAAGT GGGGATTATT TTATCCATAG CGACCAATGG TCAAATCGCC TTAGACAAAC TGTCGCAGCA GCATTTCGAT CTAGTATTAA TGGACTGCCA AATGCCGGTG ATGGATGGCT ATCAAGCCAC TCAGGCGATA AGAAAAAGGC CTGAGTTGGC AAATTTACCT GTCGTCGCCA TGACAGCCAA TGCGATGGCG GGTGATAGGG ACATGTGCAT CAGGGCGGGC ATGAACGACC ATATCGCCAA ACCCATAGAA GTGAATGTTC TCTATCAAAC CCTGTTGAAA TATCTCGCTC CCGCATCTGA CACGGCTGCA GTAGATACCT TTACTCAATC GATATTGAGT AACACTAAGG GTGAGGCAGG CAATAGTGCA GAACAAACCG TATTGCTTAA GTGGCCTGAG CACCCAGAGC TGGATATTGA TAGAGGTTTA CAATTGGTGC AACACTCGGC GCGGCTTTAT CAACGCATAT TTGATCGTTT TGTGAGCAGT CAGCGTAATG TGGTGGAACA AGTTCGCAAA GCCATCGCAG CGAATCAAGT CGAAGATGCG GTGCGTATTG CCCATACCCT TAAAGGCTTA GCGGGTAATT TAAGCTCAGC TAAATTGGTG GAGTTAGCGC GTTTACTTGA GTTGCATTTA ACTGAGGGCG CGCCCTTTGA AGCTGAGTTA GTTCAAATTC AACAGCTGGT GGCTTCAATT TGCGATGCGA TTGAATACGC TAAACCCGCA GCGGTGAATC CAGCCGAACC CCAAGACGTT GACTTGTTAT CTACAGAGGA TTTAAGGGCG GCATTACAGG CCTTGCGACA GAATTTAGAT GATGCCGATG CCAGCGCAGT GGCAAAGATT GATGCCTTAA AGCCACAGGT GAGTAGTGCA ATGTGGCAAG CGTTAAGCCC CGCCTTGTCT ATGATTAATC AGTACCAGTT TGATGAGGCG ATCGACTTGA TTGATGATGT CATTGCTCAG TTAGGATAA
|
Protein sequence | MDKSKLRTFR SRILSHIALP LILIMASVYA VNAWFSYLSS EKRLYHSLTQ EASHSASRLQ LLLEHAQANT QGLADFIGFL SSKEDMNDAE SVKSVLMNRL KRNPDFFGSA VAFKPNTFPN RKLFSPYVYR DTSGSDDLHY LDIGAEGYDY TDGTWDWWNN AINQAAGYWS KAYFDEGAGN ILMVTYSAPF GEAEHYFGVA TVDLALDGLP KQLGIAPNRL VVLDDQGRLI YHVDREKVLA TTSTQWLDKN KYRNADFWTL QAKGLDGQAR FVDDKDVVYL ASIATVPQLK WRVIVLAPEQ ELFSSLLDDV ASIILNLSLL TLLLLLTCYL AAKRLTRPLE LLESGILSFG QGKTQQLIVP KGAVSEIVTL SNTFNQMAEL LADREQAILD SRGNRFARLI DGMSDKSFYC SLDPDGQLAQ VSEGVTKVLG ISPDLLKRKY QRLFSANPLN EKNWQYTDLA LKGQNVPSHQ VEMLDDQGHL RRLDVFMQPL MSDTNELMSV EMLFTDVTEQ FSAAVWSNAV LEAAPEAMLI VDELGQIVFT NSRCLQLFGY ETGAMLGLQV EALLPQELGE RHVLERQTFL REGRDRSMAN ARHVRALKAD GNEFIAEIAL SILPTAFDGQ RQVAASIRDM TQKLAVEQKI RDSEQRFRGL VTNIPGAVYR TRIGDVWFME YISDNIAEIT GYAASQFIEN RQRTFASLIL EEDRPTCHLH IDRALAQQET FEVEYRIRHR DGSIRWVHEK GKASYTEEGI PLWFDGSIDD ITESKLALVQ LEQSRQQMTN ITESIPCTVY QLQWHSPTDR RFTFLSGAAM KMLGLHRDDL MSNFDIIAER IFDEERPDVV RALSGKSEDR LQWIREFRYR HPNGSICWME AGASGHLGEE GALTWNGYVM DITQRKTIEQ ELALSEAHFK ALFDGATIGI VNVDIKGVIL DCNDQFCADM ALSRNHLRNT AIFEVLSEQD QPIAKAQFQE LVEGKIDHYR GERSFIRPSG APLWMTVNVS ALLDAQGQFE SAVISMVDMT ELKLLSDELL LAKEQADAAS KAKGDFLANM SHEIRTPMNA IIGMSQLCLQ TELDKKQKNY VEKIERASQS LLSIINDILD FSKIEAGKLD IDSVPFQLDT MLEDLSDMFS EKAAHKQIEL LFAVAPNVPR YLLGDSLRLG QVLINLMNNA IKFTERGEVL LSLSLVEQQD DDVVLRFSVR DSGIGLTEQQ QAKLFKSFTQ ADTSTTRKYG GTGLGLAICK QLVELMGGKI GVESQLGHGS TFYFTVKLHI SDGQKLVLEQ ELEGMSVLVV DDNATARDIM RTTLESMGFR VDTVRSGEEA ISRCLLQAYE VALIDWKMPN MDGLETARQI QLQAQSQSQS QSQPQSHPQP QPQPQPKILM VSAHADHEFL TQIEQLALAG YISKPISASR LLDGIMNAIG REGILPVRRR TEELAPQLLV PLQGKRILLV EDNEMNLEVA SEFLEQVGII LSIATNGQIA LDKLSQQHFD LVLMDCQMPV MDGYQATQAI RKRPELANLP VVAMTANAMA GDRDMCIRAG MNDHIAKPIE VNVLYQTLLK YLAPASDTAA VDTFTQSILS NTKGEAGNSA EQTVLLKWPE HPELDIDRGL QLVQHSARLY QRIFDRFVSS QRNVVEQVRK AIAANQVEDA VRIAHTLKGL AGNLSSAKLV ELARLLELHL TEGAPFEAEL VQIQQLVASI CDAIEYAKPA AVNPAEPQDV DLLSTEDLRA ALQALRQNLD DADASAVAKI DALKPQVSSA MWQALSPALS MINQYQFDEA IDLIDDVIAQ LG
|
| |