Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0852 |
Symbol | |
ID | 7088088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 996744 |
End bp | 997181 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 643459766 |
Product | methylation site containing protein |
Protein accession | YP_002356793 |
Protein GI | 217972042 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4970] Tfp pilus assembly protein FimT |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.992733 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGAACA CGTGGAATCA AGGATTTACC TTAGTTGAGC TTATGGTTAC CGTCGCGATT ATCGGTATTT TAGGCAGCTT AGCACTCCCT TCGTACCGCG ATGTTATCGC ACGTGAACAG CTAACCGCAG CCGCGAATGA ATTGGTCTCT AGCTATAAAT TTGCCCGCAG CGAAGCGATA AAACGCAGCA CTTCAATTAC CCTCACGGCA ACAGAAGCGG GACTTTGGGT CATTAAAGAT AGCGACGATA ACGAATTGAA GGTTTTTACG CCCCCGACAC GTGGGGTTGC TGTAACAGGA CTGGCTAGTA TCAGCATCAG TGCCACGGGC AATACAGCCA AAACCAGTAT TTCATTGGCG AACAGTCAAG GTGAAAACAT GAATTTATGC ATTTTACCGA GCGGCCAAAG TCAGCTTCAG AGCGGGGATT GTGCATGA
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Protein sequence | MSNTWNQGFT LVELMVTVAI IGILGSLALP SYRDVIAREQ LTAAANELVS SYKFARSEAI KRSTSITLTA TEAGLWVIKD SDDNELKVFT PPTRGVAVTG LASISISATG NTAKTSISLA NSQGENMNLC ILPSGQSQLQ SGDCA
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