Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0844 |
Symbol | |
ID | 7088080 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 989261 |
End bp | 990148 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 643459758 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_002356785 |
Protein GI | 217972034 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.033432 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACATCC CAATCAAGAC CTTACAGTGT TTTCTGACCC TAGTGGAAAC TGAAAACTTT ACCCGCGCCG CGCAGAAATG TTTTATCACT CAGCCGACAC TGAGCAAAAT CATCCAAAGA CTCGAGGAGA GCCTAGGGGA AACCTTGCTG ATCCGAAATA ACCAAAAAGT TGAGCTCACT CAGGCGGGGC AGCTATTTGA GCACAGTGCA CGGGAAATCC TCGGCCAATG GCATAGATTG CAGGAGGACA TGAGTAACCT CAGCGGTCTC AAATCAGGGC GGTTACGACT GGGTGTATGC CCTATGATGA GCAGCCTTAT CATAGGCTTG CTCACTAGCT ACCGTAAACG TTATCCGGGG GTTGAACTAC ACATGTATGA GTACGGCGGA TTCGGCTGCG AGCAAGCCCT GCTCAATAAC AGTCTCGATA TCGCCTTTAC CGCGCTACCC ACAACCCATG AGACTGAACT CGTCAACCAA CCCCTGACTA AGTACCCTTT ACTTGCATGC CTGCCTGAGG GGCATCCCTT AGCCGAGAAA GACCACTTAA ACTGGCAGGA CTTCCAACCC TATCCTTTTA TCCTCTATAA CGAAGACTTC TCCCTCGCTA AGTTGATCAA TCGGCTCAGC CGCAAAGCAG GTGTTCAGCT CAATATTGCC TTTCGCAGCG GTCAGTGGGA TTTCCTCGCC GCCATGGTTG AGGCCGATAT GGGTGTCGCC ATTTTACCTG AGCCGATTTG CAATAGATTA AGCACCAGCA AGCTGGTCTT TAAACCTATG CAGCCAGCAA TGACATGGGA TCTGGCGCTT ATTTGGCGAC AAAGTTTACC TTTAACGCCC GCGGCCAAGG CCTTGCTCGA ATTAAGTAAA CAAAAGACTG AACGCTGA
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Protein sequence | MNIPIKTLQC FLTLVETENF TRAAQKCFIT QPTLSKIIQR LEESLGETLL IRNNQKVELT QAGQLFEHSA REILGQWHRL QEDMSNLSGL KSGRLRLGVC PMMSSLIIGL LTSYRKRYPG VELHMYEYGG FGCEQALLNN SLDIAFTALP TTHETELVNQ PLTKYPLLAC LPEGHPLAEK DHLNWQDFQP YPFILYNEDF SLAKLINRLS RKAGVQLNIA FRSGQWDFLA AMVEADMGVA ILPEPICNRL STSKLVFKPM QPAMTWDLAL IWRQSLPLTP AAKALLELSK QKTER
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