| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0827 |
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| Symbol | |
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| ID | 7088060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | + |
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| Start bp | 956830 |
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| End bp | 958281 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 643459738 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_002356768 |
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| Protein GI | 217972017 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00460212 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000259986 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAATACAA AAATATTTAA TCGACACTTT TCGCCTCGTA GCTGCGCGAT TGCTGTGGGC
ATAGCTTTGG GAATCGCCTT GCTGAGTGGC TGTGGCAGTT TCATGCGTTC AGACTTTGAG
CCGCCCGCAT TGGCGATTCC CGAACAGTGG CAAAACACCA CAGTGAACGA GCAAGTAAAA
GTCGATCCTT GGTGGCAGCA GTTTCATCAG CCTGAGCTTG ATAAGCTGGT TAGCCAAGTG
TTGAGCACCA ACAATGACTT AACGCTGGCG ACCTTAACCC TGCGTAAAGC GCGTTTGCAG
GCAGGACTAA CACGGGATGA TCTATACCCG CAACTATCGG CCAATCTTGG TGCTTCCCGT
AATCAGCCAC TCGATGGCGG CGACGCAACT AAGAGTTATC AAGCCAACTT GTCTGTCAGT
TATGAGGTGG ATTTGTGGGG CAAAGTGTCG GCCAATATCG ACCAAGCCCA ATGGGCGGCG
CTGGCGAGCG CCGAAGATAG GGAAAGCACC ACCCAAAGCC TAGTGGCGAC CACTGCATCC
TTGTATTGGC AGATAGGATA TTTAAATCAA CGGGTTGATT TAAGCCAAAA GAGCATAGCG
TACAGCAAAC AAACGCTGGC TTTAACCCAA AGGCAGTATG ATTCTGGCGC CGTTACGCAA
GTGAATGTGC TCGAAGCGCA GCGCAGCATG GCGGGACAAG AGGCGGCCCA TAGTCAGCTT
ATTCAGCAAT TAACTGTGGC TAAAAATGCC CTCGCGATAT TACTCAATCA GGCACCAGCT
GCTGACCCAG CGCAGAGTTT AGCCTCAGGG GAGACTTGGG TTGAGATTAA ACAGCTCCCT
GACGTGGCAG TGCCGGACGT TAGTGTGGGC GTACCCGCAG ATTTGTTAGT CAGACGCCCA
GATGTGAAGG CTTCCTTGTA TCAACTGCGC TCCGCCTTGG CGAGTAAAGA CGCGACCTAT
GCGAGTTATT TCCCAAGCCT GAGTTTAACC GGCGGTGTCG GAGAGTCGAC CTCAGAGTTA
AAAGAGCTGT TACGTAATCC CGTTGGCAGT TTAGGCGCTG GGCTTGTCTT GCCCTTTTTG
CAGTGGAATC AAATGCAAAT CAATAACGAA ATTGCCGATA TCGATTATCA AACTGCAGTG
GTGAATTATC GCAAGACGCT TTATTCCGCC TTTGAAGATG TCGATAATGC GATTTCGGCT
AAGCAGCAAT ATCGTTATCA AGGGGAGAAG TTGGCGCAGC AATTTAGCGC CGCGGCAGCC
GTTGAAGCCA TTTACGAGAG TCAGTATCGC AATGGTGCTA TCGGTATTCA GAATTGGATT
GATGCCCAAG AGAATCGTCG CAGCGCCGAG GCGGCTTTGC TCGAGAATCG TTACAACCAA
CTCACCGCCC AAGCGATGCT TTATCAAGCC CTTGGCGGCA GCGATATCGC CCCGCCTTTG
GCAAAGGAAT AA
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| Protein sequence | MNTKIFNRHF SPRSCAIAVG IALGIALLSG CGSFMRSDFE PPALAIPEQW QNTTVNEQVK
VDPWWQQFHQ PELDKLVSQV LSTNNDLTLA TLTLRKARLQ AGLTRDDLYP QLSANLGASR
NQPLDGGDAT KSYQANLSVS YEVDLWGKVS ANIDQAQWAA LASAEDREST TQSLVATTAS
LYWQIGYLNQ RVDLSQKSIA YSKQTLALTQ RQYDSGAVTQ VNVLEAQRSM AGQEAAHSQL
IQQLTVAKNA LAILLNQAPA ADPAQSLASG ETWVEIKQLP DVAVPDVSVG VPADLLVRRP
DVKASLYQLR SALASKDATY ASYFPSLSLT GGVGESTSEL KELLRNPVGS LGAGLVLPFL
QWNQMQINNE IADIDYQTAV VNYRKTLYSA FEDVDNAISA KQQYRYQGEK LAQQFSAAAA
VEAIYESQYR NGAIGIQNWI DAQENRRSAE AALLENRYNQ LTAQAMLYQA LGGSDIAPPL
AKE
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