| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0824 |
|---|
| Symbol | |
|---|
| ID | 7088057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 952321 |
|---|
| End bp | 953100 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 643459735 |
|---|
| Product | transcriptional regulator, ModE family |
|---|
| Protein accession | YP_002356765 |
|---|
| Protein GI | 217972014 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2005] N-terminal domain of molybdenum-binding protein |
|---|
| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain
[TIGR00638] molybdenum-pterin binding domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.027921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.00000000132431 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAC ATGCATTACT TACGCTTTCC CTCGGGGATA AGCCCTTCGC CAATCCTAGG
CGGATAAGCC TGCTCGAGCA GGTCGCCAAC ACAGGCTCGA TAAGCCAAGG CGCCAAGCTT
GCGGGGATAA GTTATAAAGC GGCGTGGGAC GCGATCAATG AGATGAACAC CGCCATGCCC
GAACCCGTAG TGTGCAGCGA AAAGGGCGGT AAAGGTGGTG GTGGCGCTAA ACTCACCGAA
TTTGGCGAGC GGTTGCTCAA GGTGTATTCC ATCACCTCCC AAGTACAAGA AATGGCCTTG
GCCGCCTTGC TCGATGAGTC CGTCGACATG CACAGTTTGT TGGATGTGAT GGCGCATTTC
TCCCTGAATA CTAGCGCCCG CAATCAGTTA ACGGGCCGCA TCAATGGCAT TGATTCATTT
GGATTAAATG ACAACATCAG CGTGACCTTA GCGGGCGGAC AACAGATTCA GATTTCAGTG
ACCCATTCGA GCCGCGAACG CTTGCAGTTA GCCCTAGGTA AATCCGTATT GTTACTGTTT
AAAGCCCCCG CAGTACTGGC TATGACTCAT GCCTGCGAAG TGGGTGGGCA AAATTGCCTA
AGCGGTCGTT TGCTGAGCGT GACTGAACTT GGCGATAAGG CCGAATTAGC CATAGATATT
GATGGCAAAG ACATCATCTA TTCAGTGATA CCACTCACCC AAATGCAGAG TTTGGCTGTC
GGCGAATCAT GTTTCGCCTG TTTTGATGCC ACGCAGGTGA TCCTCGCCAG CATGAATTAG
|
|---|
| Protein sequence | MDLHALLTLS LGDKPFANPR RISLLEQVAN TGSISQGAKL AGISYKAAWD AINEMNTAMP
EPVVCSEKGG KGGGGAKLTE FGERLLKVYS ITSQVQEMAL AALLDESVDM HSLLDVMAHF
SLNTSARNQL TGRINGIDSF GLNDNISVTL AGGQQIQISV THSSRERLQL ALGKSVLLLF
KAPAVLAMTH ACEVGGQNCL SGRLLSVTEL GDKAELAIDI DGKDIIYSVI PLTQMQSLAV
GESCFACFDA TQVILASMN
|
|---|
| |