Gene Sbal223_0807 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0807 
Symbol 
ID7088040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp932602 
End bp933204 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content46% 
IMG OID643459718 
ProductNUDIX hydrolase 
Protein accessionYP_002356748 
Protein GI217971997 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID[TIGR00052] nudix-type nucleoside diphosphatase, YffH/AdpP family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000627891 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000549987 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACCCC CTGTTTTTTC GCAAACGGAT ATTGAGATCT TAGAAAAAAA ATCCCTGTAC 
CAAGGATTTT TCTCAATGGA CGAATACACT TTCAAACATA AATTATTTGC TGGCGGCTGG
AGCAAACCTG TCACTCGCGA AGTGTTTGAA CGGGGTCATG CAGTCGTCGT TCTGCCCTAT
GATGCCAGAC AAGATAAAGT GGTACTCATC GAACAGGTAC GTTTTCCTGC ATTAGCAACC
ACTAAATCTC CTTGGCTTCT CGAGTTGGTC GCGGGTATGA TTGCGCCCGA AGAAACGCCT
CTGGACGTTG CGCACCGCGA ATTAATGGAA GAAACCGGCT TAGTTGCTAA GCAAATGCAC
AGCGTGAATA GTTATCTTGC CAGCCCGGGT GGCAGCACAG AACGCTTCTA TTTCTATTGG
GCCGATGTCG ATTCGAACGA CGCCCGTGGA TTGCATGGAT TAGCTGAAGA GCACGAAGAT
ATTCGATTGC ATGTCATGAG CCGCGAGCAA GCTTATAATA GTGTGGTTGC GGGCGAGATC
GATAATGCGT CGACCGTCAT TGGATTACAA TGGTTACAAT TAAACTATCA ACAACTGGTT
TAA
 
Protein sequence
MKPPVFSQTD IEILEKKSLY QGFFSMDEYT FKHKLFAGGW SKPVTREVFE RGHAVVVLPY 
DARQDKVVLI EQVRFPALAT TKSPWLLELV AGMIAPEETP LDVAHRELME ETGLVAKQMH
SVNSYLASPG GSTERFYFYW ADVDSNDARG LHGLAEEHED IRLHVMSREQ AYNSVVAGEI
DNASTVIGLQ WLQLNYQQLV