Gene Sbal223_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0798 
Symbol 
ID7088031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp924797 
End bp925861 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content48% 
IMG OID643459709 
Productintegrase family protein 
Protein accessionYP_002356739 
Protein GI217971988 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000196141 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCATCTT ATAGCATTCA AAAACGTGAA AAAGCCGACG GTACTGTGCG GCATCGCTGC 
CTAGTTCGTG TAAAGAAAAA CGGCAAAATA TTATACACGG AGCAACGTAC CTTTACCAAA
TATGCCGCTG CCGAGGCATG GGGTAAAGAT CGGGTGATTG ATATTGAGTC AAACGGGTTT
GCTACTGAGG ATACGGCTCC TATTACATTG GGCAGCATCA TCAGCAAAGC CCTGACAGAT
GAAAACATCG ACAGCAGCAT TGGTCGTTCG AAGCGCTTTT GTTTACGGCT GTTATCGGAT
TGCGATATTG CTAAATTGAA TCTGACTGAT ATTAAGCCGC ACCACATCAT CGATCACTGT
AAATTGCGAC GCAGCGCAGG CACAGGGCCA TCTACTATTG CAGTTGATGT AAGCGTGATC
CGATGGCTGC TACGAATCGC TAAATCAAAT TTTGGGCATG AGGTTTCACA AATTTCGGTC
ATTGAGGCTT ACGATGCACT GTATAGCCAA GACTTGATCG CTAAATCGGG CAAGCGTTCG
CGCAGACCGA CTACGGATGA GATTGAGAGG TTAAAAGTTG GATTAGCTGC AAGAGCAGAT
CAACGGGCTG CACACATCCC TTATATTGAT TTGCTGGATT TCTCGATACT GAGTTGCATG
CGTATTGGTG AAGTGTGCCG GATAACATGG GACGATGTAG ATGAGGCACA AAAGGCCGTG
ATCGTTCGTG ACCGTAAGGA CCCGCGCAAA AAAGCAGGCA ACCACATGTT GGTACCGCTG
TTGGGTGGTG CCTGGGAGAT ACTGCAAAAG CAGCCGAGGA ATGATGCGCG GGTTTTCCCC
TACAACGAGC GCAGCGTTAC TGCAGGGTTT CAGCGGGTGC GTAACGAATT GGGCATTGAA
GATTTACGCT ATCACGACCT AAGGCGTGAA GGCGCCAGCC GGCTATTTGA GAAGGGCTAT
AGTATTGATG AAGTGGCACA GGTAACTGGA CACAGGAATA TTAATACACT GTGGCAAGTG
TATACCGAGT TATTCCCTAA ACGATTGCAT GATAAGGATT GCTAA
 
Protein sequence
MASYSIQKRE KADGTVRHRC LVRVKKNGKI LYTEQRTFTK YAAAEAWGKD RVIDIESNGF 
ATEDTAPITL GSIISKALTD ENIDSSIGRS KRFCLRLLSD CDIAKLNLTD IKPHHIIDHC
KLRRSAGTGP STIAVDVSVI RWLLRIAKSN FGHEVSQISV IEAYDALYSQ DLIAKSGKRS
RRPTTDEIER LKVGLAARAD QRAAHIPYID LLDFSILSCM RIGEVCRITW DDVDEAQKAV
IVRDRKDPRK KAGNHMLVPL LGGAWEILQK QPRNDARVFP YNERSVTAGF QRVRNELGIE
DLRYHDLRRE GASRLFEKGY SIDEVAQVTG HRNINTLWQV YTELFPKRLH DKDC