| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0798 |
|---|
| Symbol | |
|---|
| ID | 7088031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 924797 |
|---|
| End bp | 925861 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643459709 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_002356739 |
|---|
| Protein GI | 217971988 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.00000196141 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCTT ATAGCATTCA AAAACGTGAA AAAGCCGACG GTACTGTGCG GCATCGCTGC
CTAGTTCGTG TAAAGAAAAA CGGCAAAATA TTATACACGG AGCAACGTAC CTTTACCAAA
TATGCCGCTG CCGAGGCATG GGGTAAAGAT CGGGTGATTG ATATTGAGTC AAACGGGTTT
GCTACTGAGG ATACGGCTCC TATTACATTG GGCAGCATCA TCAGCAAAGC CCTGACAGAT
GAAAACATCG ACAGCAGCAT TGGTCGTTCG AAGCGCTTTT GTTTACGGCT GTTATCGGAT
TGCGATATTG CTAAATTGAA TCTGACTGAT ATTAAGCCGC ACCACATCAT CGATCACTGT
AAATTGCGAC GCAGCGCAGG CACAGGGCCA TCTACTATTG CAGTTGATGT AAGCGTGATC
CGATGGCTGC TACGAATCGC TAAATCAAAT TTTGGGCATG AGGTTTCACA AATTTCGGTC
ATTGAGGCTT ACGATGCACT GTATAGCCAA GACTTGATCG CTAAATCGGG CAAGCGTTCG
CGCAGACCGA CTACGGATGA GATTGAGAGG TTAAAAGTTG GATTAGCTGC AAGAGCAGAT
CAACGGGCTG CACACATCCC TTATATTGAT TTGCTGGATT TCTCGATACT GAGTTGCATG
CGTATTGGTG AAGTGTGCCG GATAACATGG GACGATGTAG ATGAGGCACA AAAGGCCGTG
ATCGTTCGTG ACCGTAAGGA CCCGCGCAAA AAAGCAGGCA ACCACATGTT GGTACCGCTG
TTGGGTGGTG CCTGGGAGAT ACTGCAAAAG CAGCCGAGGA ATGATGCGCG GGTTTTCCCC
TACAACGAGC GCAGCGTTAC TGCAGGGTTT CAGCGGGTGC GTAACGAATT GGGCATTGAA
GATTTACGCT ATCACGACCT AAGGCGTGAA GGCGCCAGCC GGCTATTTGA GAAGGGCTAT
AGTATTGATG AAGTGGCACA GGTAACTGGA CACAGGAATA TTAATACACT GTGGCAAGTG
TATACCGAGT TATTCCCTAA ACGATTGCAT GATAAGGATT GCTAA
|
|---|
| Protein sequence | MASYSIQKRE KADGTVRHRC LVRVKKNGKI LYTEQRTFTK YAAAEAWGKD RVIDIESNGF
ATEDTAPITL GSIISKALTD ENIDSSIGRS KRFCLRLLSD CDIAKLNLTD IKPHHIIDHC
KLRRSAGTGP STIAVDVSVI RWLLRIAKSN FGHEVSQISV IEAYDALYSQ DLIAKSGKRS
RRPTTDEIER LKVGLAARAD QRAAHIPYID LLDFSILSCM RIGEVCRITW DDVDEAQKAV
IVRDRKDPRK KAGNHMLVPL LGGAWEILQK QPRNDARVFP YNERSVTAGF QRVRNELGIE
DLRYHDLRRE GASRLFEKGY SIDEVAQVTG HRNINTLWQV YTELFPKRLH DKDC
|
|---|
| |