| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0731 |
|---|
| Symbol | |
|---|
| ID | 7088123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | - |
|---|
| Start bp | 871029 |
|---|
| End bp | 871772 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643459643 |
|---|
| Product | protein of unknown function DUF481 |
|---|
| Protein accession | YP_002356673 |
|---|
| Protein GI | 217971922 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3137] Putative salt-induced outer membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000132441 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
|---|
| Fosmid unclonability p-value | 0.0000000113905 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAG TTATTGCGCC AATCTTTTTA TTTTCCCTTT CATTTCCTGC GCTTGCGCTT
GTTCCACCTG ATTATCAGGA ACCGCCCAGC GATTTTACCG CAGAAATCGA AGCGGGTTTG
CAACTGAATA CAGGCAATAC CGAATCCAGC AGTTTTAACG GTCGAACCCA ACTGATTTAC
GACACTAAGC AAACCAAGCA AGAAGCCACG CTCAAAGCCT ACTTCGCCTC AGAAAAAAGC
AAGACGACTT CCGAAAAATA CGAACTCCAA CTCCAGTCGA ACTATAAACT CACTAAGGGT
TATATCTTCG GACGCGGTGA TTTCACTTGG GATCAATTCG GTAGTTACAC GCAAATATCA
ACTATTTCGA GTGGTTACGG TTTTAATGCC ATCAGTAGCT ACAAGACCAA ACTCAGTCTC
GAAGTCGGCC CCGGTTATCG ATATAACTTA CCGGCCGAAT CTGTCGATAT TCCCAATCCT
GATGCTGAGA AAGATGTCAT TCTGCGTACC GCTGCAAAGT TTTCTCAAAA ACTGCAGGAA
TATAGCAGTC TCAATGCTGA TTTAACCGCC GAAATGGGCG AAAACAACAA TACCCTCACC
TTAGACATGA ACTACAAGAA TCTGGTGTTC CAAGATTGGG CTTTTAAAAT CGGCATGAAC
ATCAAATACA CTGAAGTGGT ACCAGAAGGT AGCCAGCAGA CAGATACCAT CACCACCTTC
AACCTGCTTT ATACCTTTAG ATAA
|
|---|
| Protein sequence | MLKVIAPIFL FSLSFPALAL VPPDYQEPPS DFTAEIEAGL QLNTGNTESS SFNGRTQLIY
DTKQTKQEAT LKAYFASEKS KTTSEKYELQ LQSNYKLTKG YIFGRGDFTW DQFGSYTQIS
TISSGYGFNA ISSYKTKLSL EVGPGYRYNL PAESVDIPNP DAEKDVILRT AAKFSQKLQE
YSSLNADLTA EMGENNNTLT LDMNYKNLVF QDWAFKIGMN IKYTEVVPEG SQQTDTITTF
NLLYTFR
|
|---|
| |