| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0720 |
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| Symbol | |
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| ID | 7088112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 858329 |
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| End bp | 859411 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 643459632 |
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| Product | periplasmic serine protease DegS |
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| Protein accession | YP_002356662 |
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| Protein GI | 217971911 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02038] periplasmic serine pepetdase DegS |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00253499 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGATAA AAGACACACT ATTATATCTC GGTAAAGCCA CCCTTTTCGG TCTTATCATG
GCGGCCATGT TTTTATTGGT AACCCGTTAT TTCGATAACC AATCCCTCGG TAATAGCCTG
CTACAAACCC GAGCCAACAA CACAGTCGAG CTCTCCTTTG CCAAGGCGGT CCGCCGCGCA
GCCCCTGCGG TTGTTAACAT TTATAGCCTC AGCATAGATC AGAACCGCCC ACTTAACTCG
GGTTCGCTAC AGGGCCTAGG TTCTGGGGTG ATAATGAGCA AAGAAGGCTA TATTCTTACG
AATTATCATG TCATTAAAAA GGCCGACGAA ATTGTTGTCG CCCTGCAAGA TGGACGCAAA
TTTACCTCTG AAGTGGTTGG CTTCGATCCA GAAACCGATT TATCGGTACT CAAGATTGAA
GGCGATAACT TACCGATTGT CCCCGTTAAC CTCGACAGTC CGCCTCAAGT CGGTGATGTC
GTGCTCGCCA TTGGTAATCC CTACAATTTA GGCCAAACCA TTACCCAAGG CATCATAAGT
GCCACGGGTC GTAACGGCTT AAGTTCTGGT TACTTAGACT TTTTGCAAAC CGATGCGGCG
ATTAATGCCG GTAACTCGGG CGGCGCACTC ATTGACACTA ACGGCAGCCT TATCGGTATT
AATACCGCAG CATTCCAAGT GGGTGAAGAA GGCGGCGGCC ATGGGATTAA CTTCGCTATC
CCAATTAAAT TGGCCCACAG CATTATGGGT AAGTTGATTA AGAATGGCCG CGTGATCCGT
GGTGCTTTGG GGATTTCTGG CGAGCCAATT AACCCTGTTG TGGCGCAGAT CCTTAATCTA
CCCGACCTAA AAGGTGTGCT CGTTACAGGT GTCGATCCTA ATGGCCCTGC GGCGCGTGCC
CTCTTAATGC CAAGGGATGT AATTATTAAA TACGATGGTG AAGATGTGCC AGGCGTTGAA
ATGCTGATGG ACCGCATCGC TGAAACCACA CCGGGTAAGA AAGTAATGAT GACTGTGATA
CGCCAAGGTA AACAACAGGA GTTACCTGTG ATTATCGATG AAAAGGTTGT AGTCGATAAC
TAG
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| Protein sequence | MTIKDTLLYL GKATLFGLIM AAMFLLVTRY FDNQSLGNSL LQTRANNTVE LSFAKAVRRA
APAVVNIYSL SIDQNRPLNS GSLQGLGSGV IMSKEGYILT NYHVIKKADE IVVALQDGRK
FTSEVVGFDP ETDLSVLKIE GDNLPIVPVN LDSPPQVGDV VLAIGNPYNL GQTITQGIIS
ATGRNGLSSG YLDFLQTDAA INAGNSGGAL IDTNGSLIGI NTAAFQVGEE GGGHGINFAI
PIKLAHSIMG KLIKNGRVIR GALGISGEPI NPVVAQILNL PDLKGVLVTG VDPNGPAARA
LLMPRDVIIK YDGEDVPGVE MLMDRIAETT PGKKVMMTVI RQGKQQELPV IIDEKVVVDN
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