| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0709 |
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| Symbol | |
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| ID | 7088101 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella baltica OS223 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011663 |
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| Strand | - |
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| Start bp | 850306 |
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| End bp | 850860 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 643459621 |
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| Product | lipopolysaccharide transport periplasmic protein LptA |
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| Protein accession | YP_002356651 |
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| Protein GI | 217971900 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1934] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03002] lipopolysaccharide transport periplasmic protein LptA |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.686411 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0194673 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAAA ATAACGTATT ACTTGTCAGC CTAATGCTAA TAATGAGCAT GAGCGCCTTT
GCTAAAGTCG ACGACCTGAA ACAGGAAGTC AAAATCAAGG CTGTGAGCCA AACGGCAGAT
ATCAAGAACA ACCAGATCAT CTTCTTTGGT CCGGTTGAAG TCACCCAAGG TTCGATTAAA
ATCCATGCAG ATCAACTGCG TGCATTTTCT GCCGAAGGTG AAAATAGCAA AATTTTAGTG
GCCACTGGCA ACCCTGCGAC GTACAGCCAA GTGTTAGACG ATGGCCGTCC AGCCTCGGCG
AGCGCGAAAG AAATTCGTTA CGATATGGCG AGCCGCACCC TGACACTTAA AGGCAAAGCC
TCGTTAGATC AAGCAGGCAG CCAAGTGACG GGTAATTTGA TCCGCTACAA CATCATCCAG
CAAAAGTTAA TTGCCGAGAG TACCGGCAGT GGTGACGATC GCGTGATCAC GATTATTCAG
CCAGAAAGCT ATCAAGATGA TGCCAAACCA GACGCGCCAG CAGATAAACC TGTGAAAAAG
CAGGACTCTA AATGA
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| Protein sequence | MKQNNVLLVS LMLIMSMSAF AKVDDLKQEV KIKAVSQTAD IKNNQIIFFG PVEVTQGSIK
IHADQLRAFS AEGENSKILV ATGNPATYSQ VLDDGRPASA SAKEIRYDMA SRTLTLKGKA
SLDQAGSQVT GNLIRYNIIQ QKLIAESTGS GDDRVITIIQ PESYQDDAKP DAPADKPVKK
QDSK
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