Gene Sbal223_0693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSbal223_0693 
Symbol 
ID7086891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella baltica OS223 
KingdomBacteria 
Replicon accessionNC_011663 
Strand
Start bp835302 
End bp837242 
Gene Length1941 bp 
Protein Length646 aa 
Translation table11 
GC content45% 
IMG OID643459605 
Productdiguanylate cyclase/phosphodiesterase with GAF sensor 
Protein accessionYP_002356635 
Protein GI217971884 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATACA ATTTCGCCAT TAATCAGTCT CAAAAAGATC GTTTATTCGC CGACATTGCT 
ATCGACACAG ACAAAATCGT GGTTCCCCAA ATAATGGTTG ATAACTGGCA ACAAACCTTA
GATTTGCTCT CTGAATTGGT CGACACTCCT GCCGCGTTGA TCATGCGTGT CCATCAAACC
GATATTGAAG TGTTTACCTC GAGCCGTACT CAAGGGAATC CCTATAAAAA ACACGACAAA
GACAGTTTAG GCCACGGACT TTACTGCGAG ACTGTGATTA AAGCAGGCAA GGAACTCCAC
ATTCCTAATG CCCTAAAAGA TAAAGACTGG GATAAAAATC CGGATATAAA ACTCGGCATG
ATTGCCTACT GTGGCTTGCC TTTACGTTGG CCCGATAACA GCGCCTTTGG CACTATCTGC
ATGCTCGATA ACAAAGAGCA TAATTACAGC CAATCGTTTC GCAGCTTACT CGCTCGGTTT
CAAAATGGTA TCGAAGCCAA CCTCGTCACC CTCTATCAAC AGGCAAAGCT GCAACTGCAC
AACCAAGAGT TAGAGCAAAA AGTGCAACAA CGCACCTATG AACTCGCCGA ACTCAGTAGC
AAACTCATCA AAGAAATCGA AAATCGGACC TCCACCGAAA CCTCATTGGA ATACCATAAA
AGCTATGATC CACTGACGGG ATTACCGAAT CGCATCAATT TGATTAATAG CCTTTCGACT
ATGCTCGAAG AAGTGAATCG CAAGGAAAAG ATTTCGGTAC TCTATCTGGG GCTGCGTAAT
TTCAAGTCCA TCAACGACAG TTATGGCTAC CTGATTGGCG ATAAAATTCT CACCATTCTC
AGCCAACGTT TACAACACTA TGCCGATGAA AATACCTTCA TCGCCCGTAT TGCCGGCGCC
GAGTTTGTGA TTATTCAAGC CCATAAACCT TCGAATAACG AAACCAACAA ACTCATCAAT
AAAGTGCTTA GCTGCTGTAA TACTCCCTTT GGCGTGGCGG ATTTTGTAAT CACCATTCCG
TCGAGCATGG GTATAGCTCA AGCGCCCATC GATGGCATAG ATGCCGCCAT TCTGCTGCAA
AAAGCAGGGG CAGCGATGAC GATCAGCAAA GCCGATGGCT CAACTCACAG CTTCTTTAAT
CAAGATACTC AAGCGGCTTT GAATCTACGC TATCAACTGG AATCTCACTT AGTTGATGCA
TTGAACAAAA ACGAGTTAAG CCTTCATTAC CAACCCTTTA TTAACTTAAA GACTCAAAAA
GTGATAGGCG CCGAAGCCCT GCTGCGCTGG CACAACCCGA TTCTAGGCAA TGTCGCACCA
GACAGATTTA TCGCCTTAGC AGAACGTAAT GGGCAGATTA TAGATATTGG CAATTTTGTA
TTGCATACCG CCCTAGCTCA GGCGGCAAAA TGGTGTCGTG AGCTAGATCG TGAGTTTAAA
ATCGCCATCA ATATCTCCCC TTTGCAAATG CGCAATCCCC GTTTTAGCGA GCATATAGCT
GACTTACTCA CCCTCTATCA ATTGCCACCG ACTGCCCTAG ATCTTGAAAT CACCGAAGGC
ATGTTGATGC AGGACGAGCA CATTGCCCAC AATGCCATCC AAAAGCTGCA GGAACTCGGG
ATCCGCATCT CCTTAGATGA CTTTGGTACT GGCTATTCAT CCCTAAGTTA TCTACAAAAA
TACTCTTTCG ACACCTTAAA AATAGATCGC TGTTTTATCA ATAAACTCGA AGAAAACGAA
CAAGATAGGG AGCTCACTAA AGCGATTATT GCCATAGGCA AGAAACTGAA CTTAGTCGTG
ATCGCCGAAG GCGTGGAAAC CCTAGAACAA GATGCCTTTA TTCGTCACGA GGAATGCGAC
TTAGGCCAAG GCTACCTCTA CGGTAAACCC ATCACAGCAC ACGAGTTTGA GCAGGCATTT
ATCCATAAAA AAGAGCATTA A
 
Protein sequence
MPYNFAINQS QKDRLFADIA IDTDKIVVPQ IMVDNWQQTL DLLSELVDTP AALIMRVHQT 
DIEVFTSSRT QGNPYKKHDK DSLGHGLYCE TVIKAGKELH IPNALKDKDW DKNPDIKLGM
IAYCGLPLRW PDNSAFGTIC MLDNKEHNYS QSFRSLLARF QNGIEANLVT LYQQAKLQLH
NQELEQKVQQ RTYELAELSS KLIKEIENRT STETSLEYHK SYDPLTGLPN RINLINSLST
MLEEVNRKEK ISVLYLGLRN FKSINDSYGY LIGDKILTIL SQRLQHYADE NTFIARIAGA
EFVIIQAHKP SNNETNKLIN KVLSCCNTPF GVADFVITIP SSMGIAQAPI DGIDAAILLQ
KAGAAMTISK ADGSTHSFFN QDTQAALNLR YQLESHLVDA LNKNELSLHY QPFINLKTQK
VIGAEALLRW HNPILGNVAP DRFIALAERN GQIIDIGNFV LHTALAQAAK WCRELDREFK
IAINISPLQM RNPRFSEHIA DLLTLYQLPP TALDLEITEG MLMQDEHIAH NAIQKLQELG
IRISLDDFGT GYSSLSYLQK YSFDTLKIDR CFINKLEENE QDRELTKAII AIGKKLNLVV
IAEGVETLEQ DAFIRHEECD LGQGYLYGKP ITAHEFEQAF IHKKEH