Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sbal223_0693 |
Symbol | |
ID | 7086891 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella baltica OS223 |
Kingdom | Bacteria |
Replicon accession | NC_011663 |
Strand | - |
Start bp | 835302 |
End bp | 837242 |
Gene Length | 1941 bp |
Protein Length | 646 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 643459605 |
Product | diguanylate cyclase/phosphodiesterase with GAF sensor |
Protein accession | YP_002356635 |
Protein GI | 217971884 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCATACA ATTTCGCCAT TAATCAGTCT CAAAAAGATC GTTTATTCGC CGACATTGCT ATCGACACAG ACAAAATCGT GGTTCCCCAA ATAATGGTTG ATAACTGGCA ACAAACCTTA GATTTGCTCT CTGAATTGGT CGACACTCCT GCCGCGTTGA TCATGCGTGT CCATCAAACC GATATTGAAG TGTTTACCTC GAGCCGTACT CAAGGGAATC CCTATAAAAA ACACGACAAA GACAGTTTAG GCCACGGACT TTACTGCGAG ACTGTGATTA AAGCAGGCAA GGAACTCCAC ATTCCTAATG CCCTAAAAGA TAAAGACTGG GATAAAAATC CGGATATAAA ACTCGGCATG ATTGCCTACT GTGGCTTGCC TTTACGTTGG CCCGATAACA GCGCCTTTGG CACTATCTGC ATGCTCGATA ACAAAGAGCA TAATTACAGC CAATCGTTTC GCAGCTTACT CGCTCGGTTT CAAAATGGTA TCGAAGCCAA CCTCGTCACC CTCTATCAAC AGGCAAAGCT GCAACTGCAC AACCAAGAGT TAGAGCAAAA AGTGCAACAA CGCACCTATG AACTCGCCGA ACTCAGTAGC AAACTCATCA AAGAAATCGA AAATCGGACC TCCACCGAAA CCTCATTGGA ATACCATAAA AGCTATGATC CACTGACGGG ATTACCGAAT CGCATCAATT TGATTAATAG CCTTTCGACT ATGCTCGAAG AAGTGAATCG CAAGGAAAAG ATTTCGGTAC TCTATCTGGG GCTGCGTAAT TTCAAGTCCA TCAACGACAG TTATGGCTAC CTGATTGGCG ATAAAATTCT CACCATTCTC AGCCAACGTT TACAACACTA TGCCGATGAA AATACCTTCA TCGCCCGTAT TGCCGGCGCC GAGTTTGTGA TTATTCAAGC CCATAAACCT TCGAATAACG AAACCAACAA ACTCATCAAT AAAGTGCTTA GCTGCTGTAA TACTCCCTTT GGCGTGGCGG ATTTTGTAAT CACCATTCCG TCGAGCATGG GTATAGCTCA AGCGCCCATC GATGGCATAG ATGCCGCCAT TCTGCTGCAA AAAGCAGGGG CAGCGATGAC GATCAGCAAA GCCGATGGCT CAACTCACAG CTTCTTTAAT CAAGATACTC AAGCGGCTTT GAATCTACGC TATCAACTGG AATCTCACTT AGTTGATGCA TTGAACAAAA ACGAGTTAAG CCTTCATTAC CAACCCTTTA TTAACTTAAA GACTCAAAAA GTGATAGGCG CCGAAGCCCT GCTGCGCTGG CACAACCCGA TTCTAGGCAA TGTCGCACCA GACAGATTTA TCGCCTTAGC AGAACGTAAT GGGCAGATTA TAGATATTGG CAATTTTGTA TTGCATACCG CCCTAGCTCA GGCGGCAAAA TGGTGTCGTG AGCTAGATCG TGAGTTTAAA ATCGCCATCA ATATCTCCCC TTTGCAAATG CGCAATCCCC GTTTTAGCGA GCATATAGCT GACTTACTCA CCCTCTATCA ATTGCCACCG ACTGCCCTAG ATCTTGAAAT CACCGAAGGC ATGTTGATGC AGGACGAGCA CATTGCCCAC AATGCCATCC AAAAGCTGCA GGAACTCGGG ATCCGCATCT CCTTAGATGA CTTTGGTACT GGCTATTCAT CCCTAAGTTA TCTACAAAAA TACTCTTTCG ACACCTTAAA AATAGATCGC TGTTTTATCA ATAAACTCGA AGAAAACGAA CAAGATAGGG AGCTCACTAA AGCGATTATT GCCATAGGCA AGAAACTGAA CTTAGTCGTG ATCGCCGAAG GCGTGGAAAC CCTAGAACAA GATGCCTTTA TTCGTCACGA GGAATGCGAC TTAGGCCAAG GCTACCTCTA CGGTAAACCC ATCACAGCAC ACGAGTTTGA GCAGGCATTT ATCCATAAAA AAGAGCATTA A
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Protein sequence | MPYNFAINQS QKDRLFADIA IDTDKIVVPQ IMVDNWQQTL DLLSELVDTP AALIMRVHQT DIEVFTSSRT QGNPYKKHDK DSLGHGLYCE TVIKAGKELH IPNALKDKDW DKNPDIKLGM IAYCGLPLRW PDNSAFGTIC MLDNKEHNYS QSFRSLLARF QNGIEANLVT LYQQAKLQLH NQELEQKVQQ RTYELAELSS KLIKEIENRT STETSLEYHK SYDPLTGLPN RINLINSLST MLEEVNRKEK ISVLYLGLRN FKSINDSYGY LIGDKILTIL SQRLQHYADE NTFIARIAGA EFVIIQAHKP SNNETNKLIN KVLSCCNTPF GVADFVITIP SSMGIAQAPI DGIDAAILLQ KAGAAMTISK ADGSTHSFFN QDTQAALNLR YQLESHLVDA LNKNELSLHY QPFINLKTQK VIGAEALLRW HNPILGNVAP DRFIALAERN GQIIDIGNFV LHTALAQAAK WCRELDREFK IAINISPLQM RNPRFSEHIA DLLTLYQLPP TALDLEITEG MLMQDEHIAH NAIQKLQELG IRISLDDFGT GYSSLSYLQK YSFDTLKIDR CFINKLEENE QDRELTKAII AIGKKLNLVV IAEGVETLEQ DAFIRHEECD LGQGYLYGKP ITAHEFEQAF IHKKEH
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