| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sbal223_0689 |
|---|
| Symbol | |
|---|
| ID | 7086887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella baltica OS223 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011663 |
|---|
| Strand | + |
|---|
| Start bp | 831340 |
|---|
| End bp | 832047 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 643459601 |
|---|
| Product | Lysine exporter protein (LYSE/YGGA) |
|---|
| Protein accession | YP_002356631 |
|---|
| Protein GI | 217971880 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCAT CTTTATTACT CACCTTGGCC GTGATCCACT CGGTTGCCTT GATCAGCCCC
GGACCCGATT TCGCTATTAT GGTGAAGATT GCTACTCAGC AGTCCAGAAG CACGGCGATT
GCCGCAGCCG TGGGGATTTC AATCGCCATT TTAGCCCACA CGATTTTAAG TCTGACTGGC
GTGAGTCTGC TTATTAAGAG TTCACACACT CTGTATCTAT TAGTGCAAAT TGTGGGTGCG
TCTTACTTAG CTTGGATGGG GTTTGGTGCC CTGCGTGCAG GTCTTGCGAT ACTGGCTAAA
CGTAAAGCGA GTGCCAGTAC AAATGCTGGG ACAAATGTTG ATGCTCTTTC TGCTGACGTT
GAAGGCGCGG CGTCTATTGC TGGTGGCTTA GGTGGCGCTA TGTCACGCAG GCAAGGTTTT
TTGACTGGGC TTTATACCAA TCTATTGAAT CCCAAAGCAT TGGTGTTTTT CTTAACGCTG
TTTTCGGCCT TGATTACCCC AAGCGTTACC ACTAGTACTA AAATTGCCTC CGCAGTCTTG
TTGTTATCGC TGTCGCTGGC ATGGTTTGGC TTTTTGGCTG TGATGTTATC TAAGGCGCAG
GTGCAACTTA AATTGCAGCG ACTGACACCG ATTATCGATG CAATTATTGG AGTCATCTTT
ATGTCAGTCG CGCTGGCGAT TTACGCTAAC CTGTTGCTGA CGGCTTAG
|
|---|
| Protein sequence | MDSSLLLTLA VIHSVALISP GPDFAIMVKI ATQQSRSTAI AAAVGISIAI LAHTILSLTG
VSLLIKSSHT LYLLVQIVGA SYLAWMGFGA LRAGLAILAK RKASASTNAG TNVDALSADV
EGAASIAGGL GGAMSRRQGF LTGLYTNLLN PKALVFFLTL FSALITPSVT TSTKIASAVL
LLSLSLAWFG FLAVMLSKAQ VQLKLQRLTP IIDAIIGVIF MSVALAIYAN LLLTA
|
|---|
| |